Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03249 ATGGTTTCTACGAGACGGAGTGGATCTCTCTCTGCCAACAACTCCAAACGATCTTCCTCATCGGAAAACAAACCTCCTTCGCCGAAGCGTCAAAAGGTCGACAATGGCGGTTCGTCGGAGAAGCCGGCGTCGACACCGGCGGAGAATTCAAAGGATTTACGTACTCCGGAGCCGGTGCCTGATCCCGGGGAATGTGGCTCTGCCGACGTTCAGATCGCCGGAGCTGGTTCCGCCGATGTAGTGAGCTCCGGCAAGGTTGATGCTACGCCGGCTATGCCTGTCACGGCACCGATTGCTGATGCCGCATGCCCGTCCTTCTCTTCGTGGAGTGTATATCAGAAACAGATTCCGAATATTGAGGGAGGACCGTGGTGTAGGTTCTTGTCTCAGTCTGCACAGAATCCTAATGTTGCTGTTTGCATACCCAATTTCACGATTGGTTCTAATAGAAGTTGCAACTTTGCACTGAAAGATCAAACTATAAGTGGAAATTTATGCAAGATCAAGCACACGCAGCGTGATGGGAGTGCTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACGCATGTGAAGAAGAATACCAACTGTGTGCTTAACTCGGGTGATGAAGTGGTTTTTGGTGTTCTTGGAAATCATTCTTATATTTTTCAGCAACTAAATACTGAGGTTGCAATTAGGGGTGCAGAAGTTTCTAGTGGTGTTGGGAAATTTCTGCCGCTTGAAAGGAAAAGTGGAGACCCTTCAGCTGTGGCCGGGGCATCTATTTTGGCTTCTCTTTCCATCAAACAGGACCTTACAAGATGGAAATCTCCAACTCATACCTCTAGTAAACCTCACCAGGGTTCTGATGTCTCGAGTCATCCTGTCCTTCATGACAGTACAGAAATTGAGCTTGACGGCTCAGAGTCAACTCCAAATGTGCATACTGATAAAGCAGCAGATGCTCAAACAAATGAGAAGAATTCAACAATGGATTGCAATCCGGATGCTGGTGCAGAGGCAGGCAATGTAAAACTCTCTGGGGTATTGGAAGAAAAAAATGGGACGCTGGACATGCAGGCTGCATCAACTTTGGGTACATCTGTGCGCTGTGCTGTGTTTAAAGAAGATGTTCACGCTGCCATTCTGGATGGAAAAGAAATAGACGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAGCACAAAAAATGTCTTGGTGGCTGCTTGCTTTATGCACCTAAGGCATAAAGAGCATGAAAAGTTTACTTCAGATCTTACAACCATAAACCCTCGTATTCTGCTCTCCGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAGGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCCGAGCTACTCAAAGATGGACTAAATGCTGAAAAATCCTTCAGCAGCACTAAACAAAGTCCTTCAGCAACAAAAGTGTCTGGGAGCGTGGATCTACCTGCTACTGAAACAGAGACACCTAGCTCTTCAAATGCACCTTCAATGGGCTTTGACTCTCAACCTAAGTTGGAAACTGATAACATGCCATCCGCCTCTGGGACTGCCAAAAGTTGTTTGTTCAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGCGTATATCAAACATCTCCAAGGGGACCGTCTAATGGAGGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAGCCCATACCCGATGGAGTTGATCTTGGCGGTGTGTGCGAGGGAGGTCAAGGATTTTTCTGCAATGTCACTGATCTTCGCTTGGAAAGTAGTGCTGTAGAAGAACTGGACAAATTACTTATTCATTCATTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAGTGCACCATTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAACGGAGATTCATATGCATTTAAAAGTAAGCTTGAAAATCTTCCAGACAATGTGGTCGTAATAGGTTCTCACACTCAAAATGACAGTCGTAAGGAGAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTGGACTTGGCTTTCCCTGATAGTTTTGGACGATTGCATGACAGAGGGAAGGAAGTTCCAAAACCAAATAGAACATTGACTAAGCTCTTCCCAAATAAAATTATAATTCACATGCCTCAGGATGAGGCTCTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTTGAAACTCTCAAAATCAAAGGAAATTTACATCACTTGCGTGCAGTTTTGGGACGATGTGGAATGGAATGTGAAGGACTTGATACCTTATGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGTCACCACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCGAAGCTTGTATTATCATGTGATAGCATTCAGTATGGAATTGGGATCTTGCAGTCCGTCCAGAATGAGTCCAAGAGCCTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATTGATGTTACCTTCGATGATATTGGAGCTCTTGAAAAAGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTCTGCAAGGGGCAATTAACCAAGCCATGCAAAGGTATCCTATTATTTGGTCCTCCTGGAACAGGTAAAACAATGCTCGCAAAGGCAATTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTCTGGCGAGTAAAATTTCTCCTAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGGAGGGAAAACCCAGGGGAGCATGAGGCCATGCGAAAGATGAAGAATGAATTCATGGTAAATTGGGATGGCTTACGTACCAAGGAAACAGAGAGAGTTCTTGTGCTGGCAGCCACTAACAGGCCTTTTGACCTAGATGAAGCTGTTATAAGGAGGATGCCAAGAAGATTGATGGTAAATTTGCCAGACGCTCCCAATAGAGCAAAAATATTGAAAGTCATACTGGCCCAAGAGGAATTGTCTCCTGATGTTGATTTGGATGCAGTTGCTACTATGACAGATGGATATTCCGGAAGTGATCTTAAGAATTTATGTGTTACTGCAGCACATCGGCCTATTAAAGAGATATTAGAAAAAGAAAAAAAGGAACGTGTTGCTGCTCTAGCAGAAGGTCAACCAGCTCCAGCTTTGTGTAGCAGTGTGGATATCAGATCATTAAACATGGAAGACTTCAAATATGCTCATCAACAGGTTTGCGCAAGTGTTTCTTCTGAATCAGTAAACATGACTGAGCTTTTACAATGGAATGATCTATATGGAGAAGGGGGTTCAAGAGTAAAGAAAGAACTGAGCTATTTCATGTGA 3600 0.4331 MVSTRRSGSLSANNSKRSSSSENKPPSPKRQKVDNGGSSEKPASTPAENSKDLRTPEPVPDPGECGSADVQIAGAGSADVVSSGKVDATPAMPVTAPIADAACPSFSSWSVYQKQIPNIEGGPWCRFLSQSAQNPNVAVCIPNFTIGSNRSCNFALKDQTISGNLCKIKHTQRDGSAVAVLESTGSKGSVLVNGTHVKKNTNCVLNSGDEVVFGVLGNHSYIFQQLNTEVAIRGAEVSSGVGKFLPLERKSGDPSAVAGASILASLSIKQDLTRWKSPTHTSSKPHQGSDVSSHPVLHDSTEIELDGSESTPNVHTDKAADAQTNEKNSTMDCNPDAGAEAGNVKLSGVLEEKNGTLDMQAASTLGTSVRCAVFKEDVHAAILDGKEIDVSFDNFPYYLSESTKNVLVAACFMHLRHKEHEKFTSDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFSSTKQSPSATKVSGSVDLPATETETPSSSNAPSMGFDSQPKLETDNMPSASGTAKSCLFKLGDRVKFSCSSSCGVYQTSPRGPSNGGRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGVCEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVVFSESRSAPFILFMKDAEKSIVGNGDSYAFKSKLENLPDNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNRTLTKLFPNKIIIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRAVLGRCGMECEGLDTLCIKDQTLTNENAEKIIGWALSHHLMQNSEAKPDSKLVLSCDSIQYGIGILQSVQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAQEELSPDVDLDAVATMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERVAALAEGQPAPALCSSVDIRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNDLYGEGGSRVKKELSYFM* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03249 1199 MobiDBLite consensus disorder prediction 1 69 - -
Phac3g03249 1199 Pfam ATPase family associated with various cellular activities (AAA) 935 1064 IPR003959 GO:0005524|GO:0016887
Phac3g03249 1199 CDD RecA-like_ATAD1 898 1064 - -
Phac3g03249 1199 ProSiteProfiles Forkhead-associated (FHA) domain profile. 144 197 IPR000253 GO:0005515
Phac3g03249 1199 MobiDBLite consensus disorder prediction 37 51 - -
Phac3g03249 1199 CDD FHA 144 224 - -
Phac3g03249 1199 MobiDBLite consensus disorder prediction 274 296 - -
Phac3g03249 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 893 1173 IPR027417 -
Phac3g03249 1199 MobiDBLite consensus disorder prediction 274 338 - -
Phac3g03249 1199 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 374 1198 - -
Phac3g03249 1199 MobiDBLite consensus disorder prediction 1 26 - -
Phac3g03249 1199 Coils Coil 855 875 - -
Phac3g03249 1199 SMART AAA_5 931 1068 IPR003593 GO:0016887
Phac3g03249 1199 Gene3D - 1067 1161 - -
Phac3g03249 1199 Pfam AAA+ lid domain 1088 1123 IPR041569 -
Phac3g03249 1199 Gene3D - 123 231 - -
Phac3g03249 1199 SUPERFAMILY SMAD/FHA domain 112 224 IPR008984 GO:0005515
Phac3g03249 1199 MobiDBLite consensus disorder prediction 490 539 - -
Phac3g03249 1199 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 893 1069 - -
Phac3g03249 1199 Pfam FHA domain 145 214 IPR000253 GO:0005515
Phac3g03249 1199 MobiDBLite consensus disorder prediction 306 332 - -
Phac3g03249 1199 ProSitePatterns AAA-protein family signature. 1038 1057 IPR003960 GO:0005524|GO:0016887
Phac3g03249 1199 Gene3D - 893 1174 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03249 Phac-Chr3 33301048 33314951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03249 894 1142 Calmodulin-binding Proteins AT3G56690 38.672 1.61e-40 160