Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac3g03249 | ATGGTTTCTACGAGACGGAGTGGATCTCTCTCTGCCAACAACTCCAAACGATCTTCCTCATCGGAAAACAAACCTCCTTCGCCGAAGCGTCAAAAGGTCGACAATGGCGGTTCGTCGGAGAAGCCGGCGTCGACACCGGCGGAGAATTCAAAGGATTTACGTACTCCGGAGCCGGTGCCTGATCCCGGGGAATGTGGCTCTGCCGACGTTCAGATCGCCGGAGCTGGTTCCGCCGATGTAGTGAGCTCCGGCAAGGTTGATGCTACGCCGGCTATGCCTGTCACGGCACCGATTGCTGATGCCGCATGCCCGTCCTTCTCTTCGTGGAGTGTATATCAGAAACAGATTCCGAATATTGAGGGAGGACCGTGGTGTAGGTTCTTGTCTCAGTCTGCACAGAATCCTAATGTTGCTGTTTGCATACCCAATTTCACGATTGGTTCTAATAGAAGTTGCAACTTTGCACTGAAAGATCAAACTATAAGTGGAAATTTATGCAAGATCAAGCACACGCAGCGTGATGGGAGTGCTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACGCATGTGAAGAAGAATACCAACTGTGTGCTTAACTCGGGTGATGAAGTGGTTTTTGGTGTTCTTGGAAATCATTCTTATATTTTTCAGCAACTAAATACTGAGGTTGCAATTAGGGGTGCAGAAGTTTCTAGTGGTGTTGGGAAATTTCTGCCGCTTGAAAGGAAAAGTGGAGACCCTTCAGCTGTGGCCGGGGCATCTATTTTGGCTTCTCTTTCCATCAAACAGGACCTTACAAGATGGAAATCTCCAACTCATACCTCTAGTAAACCTCACCAGGGTTCTGATGTCTCGAGTCATCCTGTCCTTCATGACAGTACAGAAATTGAGCTTGACGGCTCAGAGTCAACTCCAAATGTGCATACTGATAAAGCAGCAGATGCTCAAACAAATGAGAAGAATTCAACAATGGATTGCAATCCGGATGCTGGTGCAGAGGCAGGCAATGTAAAACTCTCTGGGGTATTGGAAGAAAAAAATGGGACGCTGGACATGCAGGCTGCATCAACTTTGGGTACATCTGTGCGCTGTGCTGTGTTTAAAGAAGATGTTCACGCTGCCATTCTGGATGGAAAAGAAATAGACGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAGCACAAAAAATGTCTTGGTGGCTGCTTGCTTTATGCACCTAAGGCATAAAGAGCATGAAAAGTTTACTTCAGATCTTACAACCATAAACCCTCGTATTCTGCTCTCCGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAGGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCCGAGCTACTCAAAGATGGACTAAATGCTGAAAAATCCTTCAGCAGCACTAAACAAAGTCCTTCAGCAACAAAAGTGTCTGGGAGCGTGGATCTACCTGCTACTGAAACAGAGACACCTAGCTCTTCAAATGCACCTTCAATGGGCTTTGACTCTCAACCTAAGTTGGAAACTGATAACATGCCATCCGCCTCTGGGACTGCCAAAAGTTGTTTGTTCAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGCGTATATCAAACATCTCCAAGGGGACCGTCTAATGGAGGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAGCCCATACCCGATGGAGTTGATCTTGGCGGTGTGTGCGAGGGAGGTCAAGGATTTTTCTGCAATGTCACTGATCTTCGCTTGGAAAGTAGTGCTGTAGAAGAACTGGACAAATTACTTATTCATTCATTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAGTGCACCATTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAACGGAGATTCATATGCATTTAAAAGTAAGCTTGAAAATCTTCCAGACAATGTGGTCGTAATAGGTTCTCACACTCAAAATGACAGTCGTAAGGAGAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTGGACTTGGCTTTCCCTGATAGTTTTGGACGATTGCATGACAGAGGGAAGGAAGTTCCAAAACCAAATAGAACATTGACTAAGCTCTTCCCAAATAAAATTATAATTCACATGCCTCAGGATGAGGCTCTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTTGAAACTCTCAAAATCAAAGGAAATTTACATCACTTGCGTGCAGTTTTGGGACGATGTGGAATGGAATGTGAAGGACTTGATACCTTATGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGTCACCACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCGAAGCTTGTATTATCATGTGATAGCATTCAGTATGGAATTGGGATCTTGCAGTCCGTCCAGAATGAGTCCAAGAGCCTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATTGATGTTACCTTCGATGATATTGGAGCTCTTGAAAAAGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTCTGCAAGGGGCAATTAACCAAGCCATGCAAAGGTATCCTATTATTTGGTCCTCCTGGAACAGGTAAAACAATGCTCGCAAAGGCAATTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTCTGGCGAGTAAAATTTCTCCTAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGGAGGGAAAACCCAGGGGAGCATGAGGCCATGCGAAAGATGAAGAATGAATTCATGGTAAATTGGGATGGCTTACGTACCAAGGAAACAGAGAGAGTTCTTGTGCTGGCAGCCACTAACAGGCCTTTTGACCTAGATGAAGCTGTTATAAGGAGGATGCCAAGAAGATTGATGGTAAATTTGCCAGACGCTCCCAATAGAGCAAAAATATTGAAAGTCATACTGGCCCAAGAGGAATTGTCTCCTGATGTTGATTTGGATGCAGTTGCTACTATGACAGATGGATATTCCGGAAGTGATCTTAAGAATTTATGTGTTACTGCAGCACATCGGCCTATTAAAGAGATATTAGAAAAAGAAAAAAAGGAACGTGTTGCTGCTCTAGCAGAAGGTCAACCAGCTCCAGCTTTGTGTAGCAGTGTGGATATCAGATCATTAAACATGGAAGACTTCAAATATGCTCATCAACAGGTTTGCGCAAGTGTTTCTTCTGAATCAGTAAACATGACTGAGCTTTTACAATGGAATGATCTATATGGAGAAGGGGGTTCAAGAGTAAAGAAAGAACTGAGCTATTTCATGTGA | 3600 | 0.4331 | MVSTRRSGSLSANNSKRSSSSENKPPSPKRQKVDNGGSSEKPASTPAENSKDLRTPEPVPDPGECGSADVQIAGAGSADVVSSGKVDATPAMPVTAPIADAACPSFSSWSVYQKQIPNIEGGPWCRFLSQSAQNPNVAVCIPNFTIGSNRSCNFALKDQTISGNLCKIKHTQRDGSAVAVLESTGSKGSVLVNGTHVKKNTNCVLNSGDEVVFGVLGNHSYIFQQLNTEVAIRGAEVSSGVGKFLPLERKSGDPSAVAGASILASLSIKQDLTRWKSPTHTSSKPHQGSDVSSHPVLHDSTEIELDGSESTPNVHTDKAADAQTNEKNSTMDCNPDAGAEAGNVKLSGVLEEKNGTLDMQAASTLGTSVRCAVFKEDVHAAILDGKEIDVSFDNFPYYLSESTKNVLVAACFMHLRHKEHEKFTSDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFSSTKQSPSATKVSGSVDLPATETETPSSSNAPSMGFDSQPKLETDNMPSASGTAKSCLFKLGDRVKFSCSSSCGVYQTSPRGPSNGGRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGVCEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVVFSESRSAPFILFMKDAEKSIVGNGDSYAFKSKLENLPDNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNRTLTKLFPNKIIIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRAVLGRCGMECEGLDTLCIKDQTLTNENAEKIIGWALSHHLMQNSEAKPDSKLVLSCDSIQYGIGILQSVQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAQEELSPDVDLDAVATMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERVAALAEGQPAPALCSSVDIRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNDLYGEGGSRVKKELSYFM* | 1200 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac3g03249 | 1199 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
Phac3g03249 | 1199 | Pfam | ATPase family associated with various cellular activities (AAA) | 935 | 1064 | IPR003959 | GO:0005524|GO:0016887 | |
Phac3g03249 | 1199 | CDD | RecA-like_ATAD1 | 898 | 1064 | - | - | |
Phac3g03249 | 1199 | ProSiteProfiles | Forkhead-associated (FHA) domain profile. | 144 | 197 | IPR000253 | GO:0005515 | |
Phac3g03249 | 1199 | MobiDBLite | consensus disorder prediction | 37 | 51 | - | - | |
Phac3g03249 | 1199 | CDD | FHA | 144 | 224 | - | - | |
Phac3g03249 | 1199 | MobiDBLite | consensus disorder prediction | 274 | 296 | - | - | |
Phac3g03249 | 1199 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 893 | 1173 | IPR027417 | - | |
Phac3g03249 | 1199 | MobiDBLite | consensus disorder prediction | 274 | 338 | - | - | |
Phac3g03249 | 1199 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 374 | 1198 | - | - | |
Phac3g03249 | 1199 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Phac3g03249 | 1199 | Coils | Coil | 855 | 875 | - | - | |
Phac3g03249 | 1199 | SMART | AAA_5 | 931 | 1068 | IPR003593 | GO:0016887 | |
Phac3g03249 | 1199 | Gene3D | - | 1067 | 1161 | - | - | |
Phac3g03249 | 1199 | Pfam | AAA+ lid domain | 1088 | 1123 | IPR041569 | - | |
Phac3g03249 | 1199 | Gene3D | - | 123 | 231 | - | - | |
Phac3g03249 | 1199 | SUPERFAMILY | SMAD/FHA domain | 112 | 224 | IPR008984 | GO:0005515 | |
Phac3g03249 | 1199 | MobiDBLite | consensus disorder prediction | 490 | 539 | - | - | |
Phac3g03249 | 1199 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein | 893 | 1069 | - | - | |
Phac3g03249 | 1199 | Pfam | FHA domain | 145 | 214 | IPR000253 | GO:0005515 | |
Phac3g03249 | 1199 | MobiDBLite | consensus disorder prediction | 306 | 332 | - | - | |
Phac3g03249 | 1199 | ProSitePatterns | AAA-protein family signature. | 1038 | 1057 | IPR003960 | GO:0005524|GO:0016887 | |
Phac3g03249 | 1199 | Gene3D | - | 893 | 1174 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac3g03249 | Phac-Chr3 | 33301048 | 33314951 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac3g03249 | 894 | 1142 | Calmodulin-binding Proteins | AT3G56690 | 38.672 | 1.61e-40 | 160 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac3g03249 | - | - | gmx:100816731 | 2125.9 |