Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03248 ATGGTTTCTACGAGACGGAGTGGATCTCTCTCTGCCAACAACTCCAAACGATCTTCCTCATCGGAAAACAAACCTCCTTCGCCGAAGCGTCAAAAGGTCGACAATGGCGGTTCGTCGGAGAAGCCGGCGTCGACACCGGCGGAGAATTCAAAGGATTTACGTACTCCGGAGCCGGTGCCTGATCCCGGGGAATGTGGCTCTGCCGACGTTCAGATCGCCGGAGCTGGTTCCGCCGATGTAGTGAGCTCCGGCAAGGTTGATGCTACGCCGGCTATGCCTGTCACGGCACCGATTGCTGATGCCGCATGCCCGTCCTTCTCTTCGTGGAGTGTATATCAGAAACAGATTCCGAATATTGAGGGAGGACCGTGGTGTAGGTTCTTGTCTCAGTCTGCACAGAATCCTAATGTTGCTGTTTGCATACCCAATTTCACGATTGGTTCTAATAGAAGTTGCAACTTTGCACTGAAAGATCAAACTATAAGTGGAAATTTATGCAAGATCAAGCACACGCAGCGTGATGGGAGTGCTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACGCATGTGAAGAAGAATACCAACTGTGTGCTTAACTCGGGTGATGAAGTGGTTTTTGGTGTTCTTGGAAATCATTCTTATATTTTTCAGCAACTAAATACTGAGGTTGCAATTAGGGGTGCAGAAGTTTCTAGTGGTGTTGGGAAATTTCTGCCGCTTGAAAGGAAAAGTGGAGACCCTTCAGCTGTGGCCGGGGCATCTATTTTGGCTTCTCTTTCCATCAAACAGGACCTTACAAGATGGAAATCTCCAACTCATACCTCTAGTAAACCTCACCAGGGTTCTGATGTCTCGAGTCATCCTGTCCTTCATGACAGTACAGAAATTGAGCTTGACGGCTCAGAGTCAACTCCAAATGTGCATACTGATAAAGCAGCAGATGCTCAAACAAATGAGAAGAATTCAACAATGGATTGCAATCCGGATGCTGGTGCAGAGGCAGGCAATGTAAAACTCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTCAGGATCTTAGCTCGACCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTATTGGAAGAAAAAAATGGGACGCTGGACATGCAGGCTGCATCAACTTTGGGTACATCTGTGCGCTGTGCTGTGTTTAAAGAAGATGTTCACGCTGCCATTCTGGATGGAAAAGAAATAGACGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAGCACAAAAAATGTCTTGGTGGCTGCTTGCTTTATGCACCTAAGGCATAAAGAGCATGAAAAGTTTACTTCAGATCTTACAACCATAAACCCTCGTATTCTGCTCTCCGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAGGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCCGAGCTACTCAAAGATGGACTAAATGCTGAAAAATCCTTCAGCAGCACTAAACAAAGTCCTTCAGCAACAAAAGTGTCTGGGAGCGTGGATCTACCTGCTACTGAAACAGAGACACCTAGCTCTTCAAATGCACCTTCAATGGGCTTTGACTCTCAACCTAAGTTGGAAACTGATAACATGCCATCCGCCTCTGGGACTGCCAAAAGTTGTTTGTTCAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGCGTATATCAAACATCTCCAAGGGGACCGTCTAATGGAGGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAGCCCATACCCGATGGAGTTGATCTTGGCGGTGTGTGCGAGGGAGGTCAAGGATTTTTCTGCAATGTCACTGATCTTCGCTTGGAAAGTAGTGCTGTAGAAGAACTGGACAAATTACTTATTCATTCATTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAGTGCACCATTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAACGGAGATTCATATGCATTTAAAAGTAAGCTTGAAAATCTTCCAGACAATGTGGTCGTAATAGGTTCTCACACTCAAAATGACAGTCGTAAGGAGAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTGGACTTGGCTTTCCCTGATAGTTTTGGACGATTGCATGACAGAGGGAAGGAAGTTCCAAAACCAAATAGAACATTGACTAAGCTCTTCCCAAATAAAATTATAATTCACATGCCTCAGGATGAGGCTCTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTTGAAACTCTCAAAATCAAAGGAAATTTACATCACTTGCGTGCAGTTTTGGGACGATGTGGAATGGAATGTGAAGGACTTGATACCTTATGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGTCACCACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCGAAGCTTGTATTATCATGTGATAGCATTCAGTATGGAATTGGGATCTTGCAGTCCGTCCAGAATGAGTCCAAGAGCCTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATTGATGTTACCTTCGATGATATTGGAGCTCTTGAAAAAGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTCTGCAAGGGGCAATTAACCAAGCCATGCAAAGGTATCCTATTATTTGGTCCTCCTGGAACAGGTAAAACAATGCTCGCAAAGGCAATTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTCTGGCGAGTAAAATTTCTCCTAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGGAGGGAAAACCCAGGGGAGCATGAGGCCATGCGAAAGATGAAGAATGAATTCATGGTAAATTGGGATGGCTTACGTACCAAGGAAACAGAGAGAGTTCTTGTGCTGGCAGCCACTAACAGGCCTTTTGACCTAGATGAAGCTGTTATAAGGAGGATGCCAAGAAGATTGATGGTAAATTTGCCAGACGCTCCCAATAGAGCAAAAATATTGAAAGTCATACTGGCCCAAGAGGAATTGTCTCCTGATGTTGATTTGGATGCAGTTGCTACTATGACAGATGGATATTCCGGAAGTGATCTTAAGAATTTATGTGTTACTGCAGCACATCGGCCTATTAAAGAGATATTAGAAAAAGAAAAAAAGGAACGTGTTGCTGCTCTAGCAGAAGGTCAACCAGCTCCAGCTTTGTGTAGCAGTGTGGATATCAGATCATTAAACATGGAAGACTTCAAATATGCTCATCAACAGGTTTGCGCAAGTGTTTCTTCTGAATCAGTAAACATGACTGAGCTTTTACAATGGAATGATCTATATGGAGAAGGGGGTTCAAGAGTAAAGAAAGAACTGAGCTATTTCATGTGA 3684 0.4319 MVSTRRSGSLSANNSKRSSSSENKPPSPKRQKVDNGGSSEKPASTPAENSKDLRTPEPVPDPGECGSADVQIAGAGSADVVSSGKVDATPAMPVTAPIADAACPSFSSWSVYQKQIPNIEGGPWCRFLSQSAQNPNVAVCIPNFTIGSNRSCNFALKDQTISGNLCKIKHTQRDGSAVAVLESTGSKGSVLVNGTHVKKNTNCVLNSGDEVVFGVLGNHSYIFQQLNTEVAIRGAEVSSGVGKFLPLERKSGDPSAVAGASILASLSIKQDLTRWKSPTHTSSKPHQGSDVSSHPVLHDSTEIELDGSESTPNVHTDKAADAQTNEKNSTMDCNPDAGAEAGNVKLSGVNDFLRPFFRILARPSCKLKLSKSICKQVLEEKNGTLDMQAASTLGTSVRCAVFKEDVHAAILDGKEIDVSFDNFPYYLSESTKNVLVAACFMHLRHKEHEKFTSDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFSSTKQSPSATKVSGSVDLPATETETPSSSNAPSMGFDSQPKLETDNMPSASGTAKSCLFKLGDRVKFSCSSSCGVYQTSPRGPSNGGRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGVCEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVVFSESRSAPFILFMKDAEKSIVGNGDSYAFKSKLENLPDNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNRTLTKLFPNKIIIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRAVLGRCGMECEGLDTLCIKDQTLTNENAEKIIGWALSHHLMQNSEAKPDSKLVLSCDSIQYGIGILQSVQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAQEELSPDVDLDAVATMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERVAALAEGQPAPALCSSVDIRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNDLYGEGGSRVKKELSYFM* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03248 1227 MobiDBLite consensus disorder prediction 1 69 - -
Phac3g03248 1227 SUPERFAMILY SMAD/FHA domain 112 224 IPR008984 GO:0005515
Phac3g03248 1227 Pfam AAA+ lid domain 1116 1151 IPR041569 -
Phac3g03248 1227 Pfam FHA domain 145 214 IPR000253 GO:0005515
Phac3g03248 1227 CDD RecA-like_ATAD1 926 1092 - -
Phac3g03248 1227 Gene3D - 921 1202 IPR027417 -
Phac3g03248 1227 ProSiteProfiles Forkhead-associated (FHA) domain profile. 144 197 IPR000253 GO:0005515
Phac3g03248 1227 MobiDBLite consensus disorder prediction 37 51 - -
Phac3g03248 1227 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 921 1097 - -
Phac3g03248 1227 Pfam ATPase family associated with various cellular activities (AAA) 963 1092 IPR003959 GO:0005524|GO:0016887
Phac3g03248 1227 CDD FHA 144 224 - -
Phac3g03248 1227 Gene3D - 123 231 - -
Phac3g03248 1227 SMART AAA_5 959 1096 IPR003593 GO:0016887
Phac3g03248 1227 ProSitePatterns AAA-protein family signature. 1066 1085 IPR003960 GO:0005524|GO:0016887
Phac3g03248 1227 MobiDBLite consensus disorder prediction 274 296 - -
Phac3g03248 1227 Gene3D - 1095 1189 - -
Phac3g03248 1227 MobiDBLite consensus disorder prediction 1 26 - -
Phac3g03248 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 921 1201 IPR027417 -
Phac3g03248 1227 Coils Coil 883 903 - -
Phac3g03248 1227 MobiDBLite consensus disorder prediction 274 336 - -
Phac3g03248 1227 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 402 1226 - -
Phac3g03248 1227 MobiDBLite consensus disorder prediction 518 567 - -
Phac3g03248 1227 MobiDBLite consensus disorder prediction 306 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03248 Phac-Chr3 33301048 33314951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03248 922 1170 Calmodulin-binding Proteins AT3G56690 38.672 1.58e-40 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03248 - - gmx:100816731 2185.22