Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03247 ATGGTTTCTACGAGACGGAGTGGATCTCTCTCTGCCAACAACTCCAAACGATCTTCCTCATCGGAAAACAAACCTCCTTCGCCGAAGCGTCAAAAGGTCGACAATGGCGGTTCGTCGGAGAAGCCGGCGTCGACACCGGCGGAGAATTCAAAGGATTTACGTACTCCGGAGCCGGTGCCTGATCCCGGGGAATGTGGCTCTGCCGACGTTCAGATCGCCGGAGCTGGTTCCGCCGATGTAGTGAGCTCCGGCAAGGTTGATGCTACGCCGGCTATGCCTGTCACGGCACCGATTGCTGATGCCGCATGCCCGTCCTTCTCTTCGTGGAGTGTATATCAGAAACAGATTCCGAATATTGAGGGAGGACCGTGGTGTAGGTTCTTGTCTCAGTCTGCACAGAATCCTAATGTTGCTGTTTGCATACCCAATTTCACGATTGGTTCTAATAGAAGTTGCAACTTTGCACTGAAAGATCAAACTATAAGTGGAAATTTATGCAAGATCAAGCACACGCAGCGTGATGGGAGTGCTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACGCATGTGAAGAAGAATACCAACTGTGTGCTTAACTCGGGTGATGAAGTGGTTTTTGGTGTTCTTGGAAATCATTCTTATATTTTTCAGCAACTAAATACTGAGGTTGCAATTAGGGGTGCAGAAGTTTCTAGTGGTGTTGGGAAATTTCTGCCGCTTGAAAGGAAAAGTGGAGACCCTTCAGCTGTGGCCGGGGCATCTATTTTGGCTTCTCTTTCCATCAAACAGGACCTTACAAGATGGAAATCTCCAACTCATACCTCTAGTAAACCTCACCAGGGTTCTGATGTCTCGAGTCATCCTGTCCTTCATGACAGTACAGAAATTGAGCTTGACGGCTCAGAGTCAACTCCAAATGTGCATACTGATAAAGCAGCAGATGCTCAAACAAATGAGAAGAATTCAACAATGGATTGCAATCCGGATGCTGGTGCAGAGGCAGGCAATGTATTGGAAGAAAAAAATGGGACGCTGGACATGCAGGCTGCATCAACTTTGGGTACATCTGTGCGCTGTGCTGTGTTTAAAGAAGATGTTCACGCTGCCATTCTGGATGGAAAAGAAATAGACGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAGCACAAAAAATGTCTTGGTGGCTGCTTGCTTTATGCACCTAAGGCATAAAGAGCATGAAAAGTTTACTTCAGATCTTACAACCATAAACCCTCGTATTCTGCTCTCCGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAGGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCCGAGCTACTCAAAGATGGACTAAATGCTGAAAAATCCTTCAGCAGCACTAAACAAAGTCCTTCAGCAACAAAAGTGTCTGGGAGCGTGGATCTACCTGCTACTGAAACAGAGACACCTAGCTCTTCAAATGCACCTTCAATGGGCTTTGACTCTCAACCTAAGTTGGAAACTGATAACATGCCATCCGCCTCTGGGACTGCCAAAAGTTGTTTGTTCAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGCGTATATCAAACATCTCCAAGGGGACCGTCTAATGGAGGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAGCCCATACCCGATGGAGTTGATCTTGGCGGTGTGTGCGAGGGAGGTCAAGGATTTTTCTGCAATGTCACTGATCTTCGCTTGGAAAGTAGTGCTGTAGAAGAACTGGACAAATTACTTATTCATTCATTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAGTGCACCATTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAACGGAGATTCATATGCATTTAAAAGTAAGCTTGAAAATCTTCCAGACAATGTGGTCGTAATAGGTTCTCACACTCAAAATGACAGTCGTAAGGAGAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTGGACTTGGCTTTCCCTGATAGTTTTGGACGATTGCATGACAGAGGGAAGGAAGTTCCAAAACCAAATAGAACATTGACTAAGCTCTTCCCAAATAAAATTATAATTCACATGCCTCAGGATGAGGCTCTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTTGAAACTCTCAAAATCAAAGGAAATTTACATCACTTGCGTGCAGTTTTGGGACGATGTGGAATGGAATGTGAAGGACTTGATACCTTATGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGTCACCACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCGAAGCTTGTATTATCATGTGATAGCATTCAGTATGGAATTGGGATCTTGCAGTCCGTCCAGAATGAGTCCAAGAGCCTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATTGATGTTACCTTCGATGATATTGGAGCTCTTGAAAAAGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTCTGCAAGGGGCAATTAACCAAGCCATGCAAAGGTATCCTATTATTTGGTCCTCCTGGAACAGGTAAAACAATGCTCGCAAAGGCAATTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTCTGGCGAGTAAAATTTCTCCTAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGGAGGGAAAACCCAGGGGAGCATGAGGCCATGCGAAAGATGAAGAATGAATTCATGGTAAATTGGGATGGCTTACGTACCAAGGAAACAGAGAGAGTTCTTGTGCTGGCAGCCACTAACAGGCCTTTTGACCTAGATGAAGCTGTTATAAGGAGGATGCCAAGAAGATTGATGGTAAATTTGCCAGACGCTCCCAATAGAGCAAAAATATTGAAAGTCATACTGGCCCAAGAGGAATTGTCTCCTGATGTTGATTTGGATGCAGTTGCTACTATGACAGATGGATATTCCGGAAGTGATCTTAAGAATTTATGTGTTACTGCAGCACATCGGCCTATTAAAGAGATATTAGAAAAAGAAAAAAAGGAACGTGTTGCTGCTCTAGCAGAAGGTCAACCAGCTCCAGCTTTGTGTAGCAGTGTGGATATCAGATCATTAAACATGGAAGACTTCAAATATGCTCATCAACAGGTTTGCGCAAGTGTTTCTTCTGAATCAGTAAACATGACTGAGCTTTTACAATGGAATGATCTATATGGAGAAGGGGGTTCAAGAGTAAAGAAAGAACTGAGCTATTTCATGTGA 3585 0.4329 MVSTRRSGSLSANNSKRSSSSENKPPSPKRQKVDNGGSSEKPASTPAENSKDLRTPEPVPDPGECGSADVQIAGAGSADVVSSGKVDATPAMPVTAPIADAACPSFSSWSVYQKQIPNIEGGPWCRFLSQSAQNPNVAVCIPNFTIGSNRSCNFALKDQTISGNLCKIKHTQRDGSAVAVLESTGSKGSVLVNGTHVKKNTNCVLNSGDEVVFGVLGNHSYIFQQLNTEVAIRGAEVSSGVGKFLPLERKSGDPSAVAGASILASLSIKQDLTRWKSPTHTSSKPHQGSDVSSHPVLHDSTEIELDGSESTPNVHTDKAADAQTNEKNSTMDCNPDAGAEAGNVLEEKNGTLDMQAASTLGTSVRCAVFKEDVHAAILDGKEIDVSFDNFPYYLSESTKNVLVAACFMHLRHKEHEKFTSDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFSSTKQSPSATKVSGSVDLPATETETPSSSNAPSMGFDSQPKLETDNMPSASGTAKSCLFKLGDRVKFSCSSSCGVYQTSPRGPSNGGRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGVCEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVVFSESRSAPFILFMKDAEKSIVGNGDSYAFKSKLENLPDNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNRTLTKLFPNKIIIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRAVLGRCGMECEGLDTLCIKDQTLTNENAEKIIGWALSHHLMQNSEAKPDSKLVLSCDSIQYGIGILQSVQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAQEELSPDVDLDAVATMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERVAALAEGQPAPALCSSVDIRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNDLYGEGGSRVKKELSYFM* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03247 1194 MobiDBLite consensus disorder prediction 1 69 - -
Phac3g03247 1194 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 888 1064 - -
Phac3g03247 1194 MobiDBLite consensus disorder prediction 485 534 - -
Phac3g03247 1194 Pfam ATPase family associated with various cellular activities (AAA) 930 1059 IPR003959 GO:0005524|GO:0016887
Phac3g03247 1194 SMART AAA_5 926 1063 IPR003593 GO:0016887
Phac3g03247 1194 SUPERFAMILY SMAD/FHA domain 112 224 IPR008984 GO:0005515
Phac3g03247 1194 ProSiteProfiles Forkhead-associated (FHA) domain profile. 144 197 IPR000253 GO:0005515
Phac3g03247 1194 MobiDBLite consensus disorder prediction 37 51 - -
Phac3g03247 1194 MobiDBLite consensus disorder prediction 274 340 - -
Phac3g03247 1194 CDD FHA 144 224 - -
Phac3g03247 1194 Pfam AAA+ lid domain 1083 1118 IPR041569 -
Phac3g03247 1194 CDD RecA-like_ATAD1 893 1059 - -
Phac3g03247 1194 MobiDBLite consensus disorder prediction 274 296 - -
Phac3g03247 1194 ProSitePatterns AAA-protein family signature. 1033 1052 IPR003960 GO:0005524|GO:0016887
Phac3g03247 1194 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 369 1193 - -
Phac3g03247 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 888 1168 IPR027417 -
Phac3g03247 1194 MobiDBLite consensus disorder prediction 1 26 - -
Phac3g03247 1194 Gene3D - 888 1169 IPR027417 -
Phac3g03247 1194 Coils Coil 850 870 - -
Phac3g03247 1194 Gene3D - 1062 1156 - -
Phac3g03247 1194 MobiDBLite consensus disorder prediction 306 332 - -
Phac3g03247 1194 Pfam FHA domain 145 214 IPR000253 GO:0005515
Phac3g03247 1194 Gene3D - 123 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03247 Phac-Chr3 33301048 33314951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03247 889 1137 Calmodulin-binding Proteins AT3G56690 38.672 1.63e-40 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03247 - - gmx:100816731 2115.89