Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03245 ATGGTCATAGAGGTTTCCTCCGGTTCCCATTTCTCCGGTTGGCATCCTTCAACGACGTCGTCTTCTTCTCCATCATCCTCTCACCCCCCGTTCATCATTGGTGTCGCTGGAGGCACTGCATCGGGGAAAACCACTGTGTGCGACATTATCATTCAGCAACTGAAAGATCACAGAGTTGTGCTCCTCTGTCAGGATTCATTCTACCGCGGTTTGACGAATGATGAGTTGCAACGCGTTCATGAGTATAACTTTGATCATCCTAATGCATTTGACACAGAGCAATTAGTAGAAACCCTCGCTCAGCTTAAATCTGGACAGTCTGTTCAGATTCCAATATATGATTTCAAGCTTCATCAGAGATCTACCGACAGATCCCGACAGGTCAATGCATCTGATGTAATCATTATGGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAGATATTTGTTGATGGAGATCCAGATGTGAGGCTTGCCCGCAGAATAAAACGTGATACAGTTGAGAGGGGTAGAGATGTACAATCAATACTGGAACAGTATGCAAAATTTGTTAAGCCTGCTTATGAAGATTTTATTCTTCCATCCAAAAAATATGCTGACATCATAATACCTCGCGGGGGAGAGAATCGTGTAGCAATTGACTTGATTGTTCAACATATCCGTACTAAGCTTGGCCAACATAACCTCTGCAAAATATATCCGAATTTGAATGTTCTAAAGTCTACTTTCCAGACCAGAGGCATGCACACTCTTATTCGTGATAGGGACATATCAAAGCATGATTTTGCTTTTTATTCAGATCGGCTAATTCGTTTGGTAGTGGAACACGGTCTTGGTTACTTGCCGTTTACTGAAAAACAAGTTATCACACCTACAGGCTCAATTTATACTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCCATTGTTCGAAGTGGCGAAAGTATGGAAAATGCCTTGCGTGCTTGCTGTAAAGGAATAAAGATCGGAAAAATTCTGATTCACCGCGATGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCTAGAGATATTTCGGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAACACTGCGAGCGAAGCAATCGAGCTTCTCATAAAGAAGGGAGTTCCAGAGTCCCAGATAATATTCCTTAACCTCATTTCTGCTCCTGAGGGCATACAATGTGTATGTAAACGTTTTCCGCATCTGAAAATTGTCACATCGGAGATCGAAGAAGGATTAAATGACCAGTTCCAGGTTATACCAGGGTTGGGAGAATTTGGAGACCGCTACTTTGGTACGGACGATTCGTAG 1356 0.424 MVIEVSSGSHFSGWHPSTTSSSSPSSSHPPFIIGVAGGTASGKTTVCDIIIQQLKDHRVVLLCQDSFYRGLTNDELQRVHEYNFDHPNAFDTEQLVETLAQLKSGQSVQIPIYDFKLHQRSTDRSRQVNASDVIIMEGILVFHEQRVRNMMNMKIFVDGDPDVRLARRIKRDTVERGRDVQSILEQYAKFVKPAYEDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLNVLKSTFQTRGMHTLIRDRDISKHDFAFYSDRLIRLVVEHGLGYLPFTEKQVITPTGSIYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDETQLIYEKLPRDISERHVLLMDPVLGTGNTASEAIELLIKKGVPESQIIFLNLISAPEGIQCVCKRFPHLKIVTSEIEEGLNDQFQVIPGLGEFGDRYFGTDDS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03245 451 PRINTS Uridine kinase signature 198 211 - -
Phac3g03245 451 PRINTS Uridine kinase signature 176 187 - -
Phac3g03245 451 PRINTS Uridine kinase signature 30 47 - -
Phac3g03245 451 PRINTS Uridine kinase signature 60 71 - -
Phac3g03245 451 PRINTS Uridine kinase signature 105 120 - -
Phac3g03245 451 PRINTS Uridine kinase signature 162 172 - -
Phac3g03245 451 Gene3D - 234 448 IPR029057 -
Phac3g03245 451 Pfam Phosphoribulokinase / Uridine kinase family 32 218 IPR006083 GO:0005524|GO:0016301
Phac3g03245 451 CDD PRTases_typeI 307 421 IPR000836 -
Phac3g03245 451 CDD UMPK 32 230 IPR000764 -
Phac3g03245 451 FunFam Uridine kinase 27 233 - -
Phac3g03245 451 MobiDBLite consensus disorder prediction 10 29 - -
Phac3g03245 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 223 IPR027417 -
Phac3g03245 451 Gene3D - 26 233 IPR027417 -
Phac3g03245 451 NCBIfam uridine kinase 30 230 IPR000764 -
Phac3g03245 451 SUPERFAMILY PRTase-like 233 449 IPR029057 -
Phac3g03245 451 FunFam Uridine kinase 234 448 - -
Phac3g03245 451 Pfam Uracil phosphoribosyltransferase 248 448 - -
Phac3g03245 451 MobiDBLite consensus disorder prediction 1 30 - -
Phac3g03245 451 PANTHER URIDINE KINASE 19 358 - -
Phac3g03245 451 ProSiteProfiles UvrC family, homology region profile. 118 219 IPR001162 GO:0009381
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03245 Phac-Chr3 33280734 33286300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03245 2 450 PRT Gene Family AT3G27190 74.419 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03245 K00876 - gmx:100816209 815.068