Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03237 ATGGCCTCTTGCATTTCTCTTTCTCTCTGTCCTCACACCTTCTGTTGCCGCCACCGTCCTTACTCTACGCGCCGTTCCCTTTCTTGCTCTCTCTCCTCTTCTTCCCTCCTCGATACGGATGGACATAAAGTTCTGCGTAAAAGATCGAGAAGGATAGAAGGTCCGAGAAAAAGCATGGAAGATTCTGTTCAACGCAAGATGGAGGAATTTTATGAAGGACGGGATGGGCCACCCCTCAGAGTTCTTCCCATTGGTGGGTTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGCAACTATGATCGCTACATCCTCATCGATGCTGGTATCATGTTTCCAGACTATGATGAGCTTGGGGTCCAGAAGATCATACCTGATACAACGTTTATAAGAAAATGGAGACACAAAATTGAAGCAGTTATTATAACACATGGTCATGAAGATCATATTGGTGCATTGCCTTGGGTCATCCCAGCATTAGATTCTCATACGCCAATTTTTGCGTCATCCTTTACAATGGAGCTTATAAGGAAGCGTTTGAAGGATCATGGTATTTTTGTTCCATCTCGACTGAAAGTTTTTAGAACGAGGAAGAAGTTTATGGCTGGGCCATTTGAAATAGAGCCTATCACAGTGACTCATTCTATTCCTGATTGCTGTGGCCTAGTGCTCCGATGTTCTGATGGTACCATTCTCCACACTGGGGATTGGAAGATTGATGAAACACCATTAGATGGTAAAGTTTTTGATCGGGAAGCTCTAGAGGAACTCTCTAAAGAAGGAGTCACGTTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGAAGGACAACCAGTGAATCTGTTGTGGCAGATTCATTATTGAGGAATATTTCAGCAGCTAAAGGACGTGTTATAACGACCCAGTTTGCATCAAATATACATCGTCTTGGAAGTGTGAAAGCTGCTGCTGATTCAACTGGTAGAAAGTTGGTATTTGTTGGCATGTCGCTAAGAACATATTTAGATGCAGCTTGGAAGGATGGAAAAGCTCCAATTGATCCATCAACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCACCAAAGGATTTGCTAATTGTTACAACGGGGTCTCAAGCAGAACCACGTGCTGCCTTAAATCTTGCATCTTACGGAAGTAGTCATTCTTTCAAGCTAACAAAGGAGGATATTGTGTTGTATTCCGCCAAGGTTATCCCTGGCAACGAGTCTCGTGTTATGGAAATGCTAAATCGCATATCAGATATTGGTTCAACTATAATTATGGGGAAGAATGAATGTCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAGGAAGTGCTTAGAATTGTGAAACCACAGCATTTTCTACCCATACATGGAGAGCTCTTGTTCTTGAAGGAACATGAATTACTTGGAAAATCAACTGGCATTCGGCACACAACTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCTCACTTGAGAAACAAAAGAGTCCTTTCGAATGGTTTCATTTCACTTGGAAAAGAGAATTTCCAGTTGATGTATAGTGATGGCGAGAAAGCATTTGGTACATCAAGTGAACTCTTTATTGATGAAAGAATGAGAATTGCATTAGATGGCATCATAGTTATTAGCATGGAAATCTTTCGCCCACAAAATTTAGAAAGTCCAGTTGAGAACACCTTAAAAGGAAAAATAAGAATTACCACAAGATGCCTGTGGCTTGACAAGGGTAAGCTGTTGGATGCACTCCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCCGCGAGCTGTCCATTGGCTCATATGGAAAGAATTGTGTCTGAGGTGGTGAGGAAAATGGTGAGGAAGTACAGTGGCAAACGGCCTGAAGTTATTGTCATTGCCGTAGAAAATCCTGCAGCTGTTCTTGCTAGTGAGATAAACATGAAGCTGTCTGGAAAATTTCACATGGATGGGACATCGACATTGAAAAAAGTGGTGGTTGGACATGGGAAAGAAAATCAGAGAACCAAAACGCAAATAAGAGATCGAATTGATGTCGGTGGTATACTACCTACTGAAGACATTGCTATCTCAAGTGGAGTTGAGGATGACTTATCGGATGCGGAAAATTCAGATGATTTTTTTAAACCACTTGTTGGATCCTCTCCAGTTGAGAAGTCAAATAAAGCTAACAATGGTTATGTTCCACAAAAAGAGAAGCCATCCCCTTTTAAGGATGGTAGTTCTGAAGACATTGAAGAAGAATGCAATTCTGTAAATACATCAAATTCCGAACCTAAATCTTCAAAATCAGCAAAGAAAAATAAATGGAAACATGATGAAGTTAAGAAGCTTATTGGTATGCGTGGGGAGATGAATGACCGATTTCAAGTTGTGAAAGGAAGGATGGCCCTCTGGGAAGAAATATCTCAGAATTTGTTGTCTAATGGGATCAGCAGAAGTCCTGGGCAGTGTAAATCTCTCTGGACATCTCTGTTACAGAAATACGAGGCTACAATTTTTTCGAGGTTGGACTTTTGTTTTGGCTATCACCAAATCAATGTGATCTCAAATGCTTGTCATAAAACAATTTTTTGGACGTTTGAGGCCACTACGGATTCTTAG 2628 0.4129 MASCISLSLCPHTFCCRHRPYSTRRSLSCSLSSSSLLDTDGHKVLRKRSRRIEGPRKSMEDSVQRKMEEFYEGRDGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGIMFPDYDELGVQKIIPDTTFIRKWRHKIEAVIITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIRKRLKDHGIFVPSRLKVFRTRKKFMAGPFEIEPITVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRNISAAKGRVITTQFASNIHRLGSVKAAADSTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSFKLTKEDIVLYSAKVIPGNESRVMEMLNRISDIGSTIIMGKNECLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNKRVLSNGFISLGKENFQLMYSDGEKAFGTSSELFIDERMRIALDGIIVISMEIFRPQNLESPVENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPASCPLAHMERIVSEVVRKMVRKYSGKRPEVIVIAVENPAAVLASEINMKLSGKFHMDGTSTLKKVVVGHGKENQRTKTQIRDRIDVGGILPTEDIAISSGVEDDLSDAENSDDFFKPLVGSSPVEKSNKANNGYVPQKEKPSPFKDGSSEDIEEECNSVNTSNSEPKSSKSAKKNKWKHDEVKKLIGMRGEMNDRFQVVKGRMALWEEISQNLLSNGISRSPGQCKSLWTSLLQKYEATIFSRLDFCFGYHQINVISNACHKTIFWTFEATTDS* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03237 875 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 435 477 IPR011108 -
Phac3g03237 875 Pfam Beta-lactamase superfamily domain 102 238 IPR001279 -
Phac3g03237 875 SMART Lactamase_B_5a 91 288 IPR001279 -
Phac3g03237 875 ProSiteProfiles Myb-like domain profile. 770 834 IPR001005 -
Phac3g03237 875 CDD RNaseJ_MBL-fold 82 493 - -
Phac3g03237 875 Pfam Myb/SANT-like DNA-binding domain 776 839 IPR044822 -
Phac3g03237 875 Gene3D - 83 495 IPR036866 -
Phac3g03237 875 MobiDBLite consensus disorder prediction 755 769 - -
Phac3g03237 875 MobiDBLite consensus disorder prediction 713 777 - -
Phac3g03237 875 PANTHER RIBONUCLEASE J 1 839 - -
Phac3g03237 875 Gene3D - 778 838 - -
Phac3g03237 875 SUPERFAMILY Metallo-hydrolase/oxidoreductase 79 493 IPR036866 -
Phac3g03237 875 Gene3D - 280 430 IPR042173 -
Phac3g03237 875 CDD GT1 780 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03237 Phac-Chr3 33218900 33230822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03237 777 875 Trihelix Transcription Factor Family AT5G01380 32.692 8.83e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac3g03237 Lactamase_B_2 1.6e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03237 - - gmx:100814619 1478