Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03234 ATGGCCTCTTGCATTTCTCTTTCTCTCTGTCCTCACACCTTCTGTTGCCGCCACCGTCCTTACTCTACGCGCCGTTCCCTTTCTTGCTCTCTCTCCTCTTCTTCCCTCCTCGATACGGATGGACATAAAGTTCTGCGTAAAAGATCGAGAAGGATAGAAGGTCCGAGAAAAAGCATGGAAGATTCTGTTCAACGCAAGATGGAGGAATTTTATGAAGGACGGGATGGGCCACCCCTCAGAGTTCTTCCCATTGGTGGGTTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGCAACTATGATCGCTACATCCTCATCGATGCTGGTATCATGTTTCCAGACTATGATGAGCTTGGGGTCCAGAAGATCATACCTGATACAACGTTTATAAGAAAATGGAGACACAAAATTGAAGCAGTTATTATAACACATGGTCATGAAGATCATATTGGTGCATTGCCTTGGGTCATCCCAGCATTAGATTCTCATACGCCAATTTTTGCGTCATCCTTTACAATGGAGCTTATAAGGAAGCGTTTGAAGGATCATGGTATTTTTGTTCCATCTCGACTGAAAGTTTTTAGAACGAGGAAGAAGTTTATGGCTGGGCCATTTGAAATAGAGCCTATCACAGTGACTCATTCTATTCCTGATTGCTGTGGCCTAGTGCTCCGATGTTCTGATGGTACCATTCTCCACACTGGGGATTGGAAGATTGATGAAACACCATTAGATGGTAAAGTTTTTGATCGGGAAGCTCTAGAGGAACTCTCTAAAGAAGGAGTCACGTTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGAAGGACAACCAGTGAATCTGTTGTGGCAGATTCATTATTGAGGAATATTTCAGCAGCTAAAGGACGTGTTATAACGACCCAGTTTGCATCAAATATACATCGTCTTGGAAGTGTGAAAGCTGCTGCTGATTCAACTGGTAGAAAGTTGGTATTTGTTGGCATGTCGCTAAGAACATATTTAGATGCAGCTTGGAAGGATGGAAAAGCTCCAATTGATCCATCAACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCACCAAAGGATTTGCTAATTGTTACAACGGGGTCTCAAGCAGAACCACGTGCTGCCTTAAATCTTGCATCTTACGGAAGTAGTCATTCTTTCAAGCTAACAAAGGAGGATATTGTGTTGTATTCCGCCAAGGTTATCCCTGGCAACGAGTCTCGTGTTATGGAAATGCTAAATCGCATATCAGATATTGGTTCAACTATAATTATGGGGAAGAATGAATGTCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAGGAAGTGCTTAGAATTGTGAAACCACAGCATTTTCTACCCATACATGGAGAGCTCTTGTTCTTGAAGGAACATGAATTACTTGGAAAATCAACTGGCATTCGGCACACAACTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCTCACTTGAGAAACAAAAGAGTCCTTTCGAATGGTTTCATTTCACTTGGAAAAGAGAATTTCCAGTTGATGTATAGTGATGGCGAGAAAGCATTTGGTACATCAAGTGAACTCTTTATTGATGAAAGAATGAGAATTGCATTAGATGGCATCATAGTTATTAGCATGGAAATCTTTCGCCCACAAAATTTAGAAAGTCCAGTTGAGAACACCTTAAAAGGAAAAATAAGAATTACCACAAGATGCCTGTGGCTTGACAAGGGTAAGCTGTTGGATGCACTCCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCCGCGAGCTGTCCATTGGCTCATATGGAAAGAATTGTGTCTGAGGTGGTGAGGAAAATGGTGAGGAAGTACAGTGGCAAACGGCCTGAAGTTATTGTCATTGCCGTAGAAAATCCTGCAGCTGTTCTTGCTAGTGAGATAAACATGAAGCTGTCTGGAAAATTTCACATGGATGGGACATCGACATTGAAAAAAGTGGTGGTTGGACATGGGAAAGAAAATCAGAGAACCAAAACGCAAATAAGAGATCGAATTGATGTCGGTGGTATACTACCTACTGAAGACATTGCTATCTCAAGTGGAGTTGAGGATGACTTATCGGATGCGGAAAATTCAGATGATTTTTTTAAACCACTTGTTGGATCCTCTCCAGTTGAGAAGTCAAATAAAGCTAACAATGGTTATGTTCCACAAAAAGAGAAGCCATCCCCTTTTAAGGATGGTAGTTCTGAAGACATTGAAGAAGAATGCAATTCTGTAAATACATCAAATTCCGAACCTAAATCTTCAAAATCAGCAAAGAAAAATAAATGGAAACATGATGAAGTTAAGAAGCTTATTGGTATGCGTGGGGAGATGAATGACCGATTTCAAGTTGTGAAAGGAAGGATGGCCCTCTGGGAAGAAATATCTCAGAATTTGTTGTCTAATGGGATCAGCAGAAGTCCTGGGCAGTGTAAATCTCTCTGGACATCTCTGTTACAGAAATACGAGTTGTTGGATGGGCTCCCTCAGGCTACAATTTTTTCGAGGTTGGACTTTTGTTTTGGCTATCACCAAATCAATGTGATCTCAAATGCTTGTCATAAAACAATTTTTTGGACGTTTGAGGCCACTACGGATTCTTAG 2649 0.4141 MASCISLSLCPHTFCCRHRPYSTRRSLSCSLSSSSLLDTDGHKVLRKRSRRIEGPRKSMEDSVQRKMEEFYEGRDGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGIMFPDYDELGVQKIIPDTTFIRKWRHKIEAVIITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIRKRLKDHGIFVPSRLKVFRTRKKFMAGPFEIEPITVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRNISAAKGRVITTQFASNIHRLGSVKAAADSTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSFKLTKEDIVLYSAKVIPGNESRVMEMLNRISDIGSTIIMGKNECLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNKRVLSNGFISLGKENFQLMYSDGEKAFGTSSELFIDERMRIALDGIIVISMEIFRPQNLESPVENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPASCPLAHMERIVSEVVRKMVRKYSGKRPEVIVIAVENPAAVLASEINMKLSGKFHMDGTSTLKKVVVGHGKENQRTKTQIRDRIDVGGILPTEDIAISSGVEDDLSDAENSDDFFKPLVGSSPVEKSNKANNGYVPQKEKPSPFKDGSSEDIEEECNSVNTSNSEPKSSKSAKKNKWKHDEVKKLIGMRGEMNDRFQVVKGRMALWEEISQNLLSNGISRSPGQCKSLWTSLLQKYELLDGLPQATIFSRLDFCFGYHQINVISNACHKTIFWTFEATTDS* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03234 882 Gene3D - 280 430 IPR042173 -
Phac3g03234 882 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 435 477 IPR011108 -
Phac3g03234 882 Pfam Beta-lactamase superfamily domain 102 238 IPR001279 -
Phac3g03234 882 SMART Lactamase_B_5a 91 288 IPR001279 -
Phac3g03234 882 ProSiteProfiles Myb-like domain profile. 770 834 IPR001005 -
Phac3g03234 882 CDD RNaseJ_MBL-fold 82 493 - -
Phac3g03234 882 MobiDBLite consensus disorder prediction 755 769 - -
Phac3g03234 882 Gene3D - 83 495 IPR036866 -
Phac3g03234 882 MobiDBLite consensus disorder prediction 713 777 - -
Phac3g03234 882 Pfam Myb/SANT-like DNA-binding domain 776 838 IPR044822 -
Phac3g03234 882 Gene3D - 778 838 - -
Phac3g03234 882 PANTHER RIBONUCLEASE J 1 838 - -
Phac3g03234 882 SUPERFAMILY Metallo-hydrolase/oxidoreductase 79 493 IPR036866 -
Phac3g03234 882 CDD GT1 780 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03234 Phac-Chr3 33216361 33230822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03234 777 873 Trihelix Transcription Factor Family AT2G38250 29.897 4.12e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac3g03234 Lactamase_B_2 1.6e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03234 - - gmx:100814619 1477.61