Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03211 ATGGCCCCTACCCATTGTAGTCCCTTTAACGGAGAAATCGATGGTGAAAATCTATCTCACGTGTTTGATATCTGGGCAACCGATCACTATCCCTATTTTCCTCATCAACCTATTTCCAAGAGTAGCAGTTCTGCCTTAGTTCTCCCCTTTTGTGACGGAACCATAAGGGATAACAAAAGGGTGAAGAGAACGGTAGGAATCCCCGTTGATTGGTTAGAAAATTTGATCGGAAACTCCCATAGTTTCCTCAACACCAACGCCAACAACAGCAGCAATAGGAATAGGGATAGTATACCAAAGCTTCATTTCAGAGATCACATACGGACTTACACTCAAAGATATCTGGCAGCGGAACCAGAAGAAGAGGTACCAGAAGATACAAATAGTTTAGAAGGTGGTGGGGCTGAAGAAGATGGTTGTCACGACGGAGTGAGGCTGGTTCAACTTCTAATAGCATGTGCAGAAGCAGTGGCTTGTCGAGATAAATCGCACGCTTCAATATTACTATCAGAACTGAGAGCCAACGCTTTAGTATTCGGATCTTCGTTTCAGAGAGTTGCTTCTTGTTTTGTTCAAGGACTAACAGAGAGGCTGAATCTGATTCAGCCCACCGGGCCCGTGAGCCCGATGCCACCCATGATGAACATTATGGACGCAGCCTCGGAAGAAATGGAGGAAGCATTCAGATTGGTTTACGAGCTGTGTCCACACATCCAGTTCGGGCACTTTGTCACTAATTCCATAGTATTGGAAGCCTTTGTGGGTGAGAGTTTTGTCCATGTCGTGGATCTCGGCATGACTCTCGGTTTACGACATGGACACCAATGGAGAGGACTGATGCAGAGCCTCGCCAATCGCAAGGCCGACGAACGTGTTCGTCGTCTGCGAATCACGGCAGTGGGACTCTGCGACAGGCTTCAATCCATTGGCGACGAACTCTCAGTATATGCAACTAATTTGGGCATCAACTTCGAGTTCTCAGTAGTGAAAAAGAATTTGGAAAATTTGGAACCTGAGGACATAGAAGTGAGGGAAGAAGAGGTTCTTGCGGTGAACAGCATTCTGCAGCTGCACTGCGTGGTGAAGGAAAGCCGAGGGGCTTTGAATTCAGTGCTGCAGATGGTTCACGGGCTTGGGCCGAAAGTGTTGGTGATGATGGAGCAGGACTCGAGTCACAACGGACCCTTTTTTCTCGGGAGATTTATGGAATCATTGCACTATTATTCTGCTATATTCGACTCCTTGGATGTTATGTTGCCCAAGTATGACACCAAGAGAGCGAAGATGGAGCAGTTTTATTTCGCTGAGGAGATAAAGAACATAGTCAGCCGTGAGGGGCCGTTGAGGATGGAGAGACACGAGAGAGTGGATCAGTGGCGAAGGAGGATGAGCAGGGCGGGGTTTCAGGCTGCGCCGATTAAGATGGTGGCTCAGGCGAAGCAGTGGCTTCAGAATAGCAAGGTGTGTGAAGGGTACACGGTGGTGGAAGAGAAAGGGTGTTTGGTTCTTGGATGGAAATCGAAGCCTATTGTGGCGGTTTCTTGCTGGAAATGCTGA 1557 0.4798 MAPTHCSPFNGEIDGENLSHVFDIWATDHYPYFPHQPISKSSSSALVLPFCDGTIRDNKRVKRTVGIPVDWLENLIGNSHSFLNTNANNSSNRNRDSIPKLHFRDHIRTYTQRYLAAEPEEEVPEDTNSLEGGGAEEDGCHDGVRLVQLLIACAEAVACRDKSHASILLSELRANALVFGSSFQRVASCFVQGLTERLNLIQPTGPVSPMPPMMNIMDAASEEMEEAFRLVYELCPHIQFGHFVTNSIVLEAFVGESFVHVVDLGMTLGLRHGHQWRGLMQSLANRKADERVRRLRITAVGLCDRLQSIGDELSVYATNLGINFEFSVVKKNLENLEPEDIEVREEEVLAVNSILQLHCVVKESRGALNSVLQMVHGLGPKVLVMMEQDSSHNGPFFLGRFMESLHYYSAIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSREGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQAKQWLQNSKVCEGYTVVEEKGCLVLGWKSKPIVAVSCWKC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03211 518 ProSiteProfiles GRAS family profile. 137 517 IPR005202 -
Phac3g03211 518 Pfam GRAS domain family 146 517 IPR005202 -
Phac3g03211 518 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 116 512 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03211 Phac-Chr3 33104129 33105808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03211 138 517 GRAS Transcription Factor Family AT1G14920 37.949 1.46e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac3g03211 GRAS 6.8e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03211 - - gmx:100813548 829.32