Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03204 ATGGAAGGCTCTGAATCCGATTCTGCTTCACTTTCCATTTCCAATGGCGAAGATCCCCAATTAAGGGCTTCTTCTCCCCCTCCTCCTCCTCCTCCTCAACCGTCAGATCTCAATCACGCGGTGGAGCATGAGACACTCTCTGGGGAGCTTCAGAGCAAGTTGGATTTGAAGGGTGAAGATGAAAGTGAGGACAAAGTTTCCGACTTGAACGACGGTGGAGGAGTTTGCGACGAAGAAACTGCTAAGGGTGATGGAGATAGTAGGGGTTCGGAGACAAATAGTTGGAATGAGGAAGTGGGTGTTGATGTTGATGTTGATGCTGATGCTGATGAAGATGAAGATGATGTTGGTGTTGGTGATGATGGAGTGGAGACGAAGGAAGAGAGAAACAGTGATATGACTCACCACTATCCTTTGAGGCCTGAAGCTGAGGATTGTGCATTTTATATGAAAACTGGGAATTGCAAGTTTGGGTTTAACTGCAAGTTTAATCACCCTATTAGGAGGAAAACCCAGGCTGTTAAAGAGAAGACGGGAGAAAGAGAAGAACCCACAGACAGATCAAGCACGACAGAATGCAAGTATTATCAAAGATCTGGAGGTTGTAAGTTTGGAAAATCTTGTAAATATAACCACACAAGAGGAAAATTTTCAACAACAGCACCAGCACCAGTTTTTGAACTTAACTTTCTTGGCCTGCCTATTCGTCAGGGGGAGAGGGAGTGCCCCTATTACATGCGCACTGGCTCTTGTAAATTTGGAGCAAACTGCAAGTTCAACCATCCTGACCCTACAGCTGTTGGAGGATGTGAACCTCCTTCAGGGTTTGGTAATGGAGGGCCTATTTCATTACAGGGTGTAGCACGACCATCTGTACCCTCCTGGTCTTCTCCAAGATCATTAAATGAAGCATCTCCTTTTGTGCCAATGATGCTTTCACCTACTCAAGGAGTTTCTACCCAAAGTTCTGACTGGAATGGATACCAGGCATCTGTTTACCTACCTGAGAGGAACATGCATCCACCTTCTACATTTGTCTTGAACAACCCAGCAGTCGATACAAATGTTTACTTGCACCATCAAAAGCAGATGTCTGTGGAAGAGTTTCCAGAAAGGCCTGGTGAACCTGAATGTAGCTACTTCTTAAAAACTGGGGATTGCAAGTTTAAATCTAATTGTAAATTTCACCATCCAAAGAATCGGATTGCAAGATTACCTCCATGCAACCTCAGTGACAAGGGTCTTCCTTTGAGACCCGACCAAAGTGTCTGCTCCCATTACAGTCGCTATGGAATTTGCAAATTTGGACCAGCTTGTAAGTTTGACCACCCAATAAACTTGCAGCCCTTAATGATGTCTGGACTTGGTGACCAGTCATATTCAAATTCAGCTAGTGTTGAGGTGGCTGGGATAGGTGAAAGTACCGGTGAAACTGATGCAACAATTCAGCAATCTGTGTAA 1461 0.447 MEGSESDSASLSISNGEDPQLRASSPPPPPPPQPSDLNHAVEHETLSGELQSKLDLKGEDESEDKVSDLNDGGGVCDEETAKGDGDSRGSETNSWNEEVGVDVDVDADADEDEDDVGVGDDGVETKEERNSDMTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEREEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGGCEPPSGFGNGGPISLQGVARPSVPSWSSPRSLNEASPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPSTFVLNNPAVDTNVYLHHQKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPLMMSGLGDQSYSNSASVEVAGIGESTGETDATIQQSV* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03204 486 MobiDBLite consensus disorder prediction 122 136 - -
Phac3g03204 486 SUPERFAMILY CCCH zinc finger 416 444 IPR036855 GO:0046872
Phac3g03204 486 ProSiteProfiles Zinc finger C3H1-type profile. 236 264 IPR000571 GO:0046872
Phac3g03204 486 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 238 262 IPR000571 GO:0046872
Phac3g03204 486 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 144 166 IPR000571 GO:0046872
Phac3g03204 486 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 190 212 IPR000571 GO:0046872
Phac3g03204 486 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 374 399 IPR000571 GO:0046872
Phac3g03204 486 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 420 444 IPR000571 GO:0046872
Phac3g03204 486 Gene3D - 416 464 - -
Phac3g03204 486 Gene3D - 353 413 - -
Phac3g03204 486 Gene3D - 183 269 - -
Phac3g03204 486 ProSiteProfiles Zinc finger C3H1-type profile. 372 400 IPR000571 GO:0046872
Phac3g03204 486 MobiDBLite consensus disorder prediction 42 86 - -
Phac3g03204 486 PANTHER PROTEIN PHOSPHATASE RELATED 66 463 - -
Phac3g03204 486 MobiDBLite consensus disorder prediction 22 36 - -
Phac3g03204 486 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g03204 486 MobiDBLite consensus disorder prediction 101 121 - -
Phac3g03204 486 Gene3D - 114 179 - -
Phac3g03204 486 SUPERFAMILY CCCH zinc finger 189 216 IPR036855 GO:0046872
Phac3g03204 486 SUPERFAMILY CCCH zinc finger 139 168 IPR036855 GO:0046872
Phac3g03204 486 SUPERFAMILY CCCH zinc finger 239 263 IPR036855 GO:0046872
Phac3g03204 486 ProSiteProfiles Zinc finger C3H1-type profile. 418 446 IPR000571 GO:0046872
Phac3g03204 486 ProSiteProfiles Zinc finger C3H1-type profile. 187 215 IPR000571 GO:0046872
Phac3g03204 486 SMART c3hfinal6 140 167 IPR000571 GO:0046872
Phac3g03204 486 SMART c3hfinal6 236 263 IPR000571 GO:0046872
Phac3g03204 486 SMART c3hfinal6 372 399 IPR000571 GO:0046872
Phac3g03204 486 SMART c3hfinal6 418 445 IPR000571 GO:0046872
Phac3g03204 486 SMART c3hfinal6 187 214 IPR000571 GO:0046872
Phac3g03204 486 ProSiteProfiles Zinc finger C3H1-type profile. 140 168 IPR000571 GO:0046872
Phac3g03204 486 MobiDBLite consensus disorder prediction 1 136 - -
Phac3g03204 486 SUPERFAMILY CCCH zinc finger 377 401 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03204 Phac-Chr3 33045929 33050583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03204 134 478 C2H2 Transcription Factor Family AT3G02830 40.164 1.54e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac3g03204 zf-CCCH 7.9e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03204 - - vun:114178095 884.404