Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03203 ATGGCGGGTTCGGAGGAAGTATTGCCGTGGCTGAAGTCGCTGCCGGTGGCGCCTGAGTACCGCCCAACCACGGCGGAGTTCCAAAACCCGATCGCCTACATCTCCAAAATCGAGAAAGAAGCCTCTCAATACGGAATCTGTAAGATCATTCCACCGCTTCCCCCTTCTCCCAAGAAAACCGCAACTGCCAACCTCACGCGCTCCCGGCCCACCTTTACCACGCGCCAACAGCAGATCGGCTTCTGCCCCCGCCGCGCGCAGCCGGTGCGCCGCCGCGTCTGGCACAGCGGCCATCACTACTCCCTTCGGGAATTCGAAGCCAAGGCTAAGGCCTTCCACAAAACCTACTTAAACAAAAACAAACCCAAACCTCTCGAACTCGAGACGCTCTACTGGAAAGCCACCTTAGACAAACCCTTCTCCGTCGAATATGCGAACGACATGCCTGGCTCCGCGTTTAGCCCCCTCCGTGCTTCGCGCGATGCCGATTACGTTGGCGACACCGCGTGGAACATGAGGGCGGTTTCGCGGGGGAGCGACTCGCTTCTTAGGTTCATGAAAGAGGAAATTCCCGGCGTGACGTCACCCATGGTCTATGTGGCAATGTTGTTCAGCTGGTTCGCGTGGCACGTGGAGGATCACGACTTGCATAGCTTGAACTACCTCCATTTCGGCGCTCCCAAGACTTGGTACGGCGTGCCTAGGGACGCTGCGGTCGCGTTCGAGGACGTTGTCAGAGTTCATGGCTACGGCGGAGAGATTAATCCTCTCGTTACTTTTGCTATTCTTGGCGAGAAAACCACGGTGATGTCTCCGGAGGTTTTTGTTGGCGCCGGTATTCCCTGCTGCAGGCTAGTTCAAAATGCTGGGGAATTTGTTGTGACGTTTCCAAGAGCGTATCACACAGGATTTAGTCATGGGTTTAACTGTGGAGAGGCAGCTAACATTGCGACGCCTGAATGGTTAAGGTTTGCTAAGGATGCTGCTATTCGCAGGGCTTCCATTAACTATCCTCCCATGGTGTCACATTTCCAGTTGCTTTATGACCTTGGCCTTGCCTTTTGTTCTAGAATCCCTGGAGGCATTAGAGCTGAACCACGAAGTTCTCGGCTTAAATATAAGAGAAACGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTACAGGACGTGGTAGAGAACAATGATCTGCTTCACACACTCAGCAAAGGGTCTGCTATAGTACTTCTTCCTCGTAGCTCTTCTGACTTTTCTGTTTGCTCAAAGTTACGCGTTGGATCACAACAACTAAAAGTGAACCCTGAATTTTCTCTCAGTGTATACGATTATGAGAGAATGGATTCCCCAGATTTTATTTCTGATGACCTTATGTTCAACAGGAATCATGGAATCAAACAAGTAAAGAGTTTTTATTCCGTAAAAGAGAAGTTTGTTACGTTGTGTGAAAGGAACAGGGTTTTGCCATTCAGTTCGGATGGGAACATATACCCTTCAAGTTCAAAAACACTGCAAGGAGACAGTGAAAAGGAAAAAGATCAAGGAGATGGGTTGTCAGATCAGAGACTATTTTCTTGTGTCACGTGTGGAATATTAAGCTTTTCCTGTGTTGCCATTGTACAACCTAGAGAACCAGCAGCTAAGTACCTTATGTCAGCTGATTGTAGTTTCTTTAATGATTGGATTGTTGGTTCTGGAGTAACTAGCAATAAATTTGCAAATGCCCATGAAGATGCAAGTATTCCCAAGCCAAGAACATATACAGGATGGACTAAGCAAAATGCCCAACATGATTCAAATGGTGTTCCCGTTCAATCTGTTGAGCTCCATGCACAGATTTCTGATCAAAATTACAAGGAGGCTTTAAATTCTGGAAGAGAAAAAGGCAATACAGCTCTTGCATTATTGGCATCAGCGTATGGGAATTCTTCTGACACTGAGGAAGACCAGGGGCGATTAGATATTGCACTTGATGGTGATGAATTAAATGTAATAAACCATCCATCCACTAATGGATCTCAGGAGATGTCAAGTATGCCTTCTCATTTCAAAGATCCCCATGCTAGTCCCATGGTTAGAGTCATTGGACTTGATAAAGGAGATGATATTCATTCAAGACGAATGGACAATTATGAGTATTATATGCATAAAAGAGTTGAGCACATTATGACTCCTTTTGACTACTCTGTTAAGTCAGAAGATCAGGACAACACTTCAGGGGTGGCATTTAGAAATACTAGGGCTGTGCCCCATCTCTCCTTGAATCGTTCCCAAGATACTCACACTGATGAAGACTCGTCTAGAATGCATATCTTCTGTTTAGAGCATGCTGTAGAAGCAGAGCAGCAACTTCGCCCAATAGGAGGAGCACACATATTTCTCCTATGTCATCCAGATTATCCAAAGATAGAGGCTGAAGCAAAGATTGTTGCAGAGGAACTGAGGATTGGTTATACATGGAAGAATACTATATACAGGCAAGCCAACAGGGAAGATGAGGTGAGGATCCAATCAGCTCTGGATAGTGAGGAAGCTATTCCTGGAAATGGGGACTGGGCTGTAAAGCTGGGAATCAATCTCTTTTACAGTGCCAATCTTAGCCGATCAGCACTTTACATTAAGCAGATTCCTTACAATTCTGTTATATATAAAGCATTTGGTCAAAGCTCTCCAGCAAGCTCGCCTACAGAGCCCAAGGTCTATCAGAGAAGGACCAACAAGCACAAAAAGGTAGTTGCTGGGAAATGGTGTGGCAAAGTTTGGATGTCCAATCAAGTCCATCCCCTTTTAGCAAAAAGAGATTTCGAAGATGTTGAGAATGAAACAAGCTTACATGGGTGGCCATTGCCTGATGAGAAAATTGAGAGATCAGTAAGTAACCACAAAAGCAATACTTCAACTCGAAAATCTGGTAAGAAATGGAAAAAATCTGTTCAGAAAGGAGGATCCTGGGAAAAAAGTTTTGCTGAGAGAGATTGGCTTTCAGATAATTCCATTGAAGATAAATCCAATAAATATCGAAGGAGGATTCTTGGGAGTAAGCAAACCAGGCATGTTGAGAGAGATGATACTACTTCACAAGGGGATTATTCTCCTCTGCCACATCATAAAAAGCCTATAAGCAAGCATTCAGAATCTAGTGGAAATGATGCAGTTTCTGATGATTTGCTGGATGATGATTCTTGTATACAGCATCGAAGGAGGGCTAACACCAGTGAAGCTAAATTTGTTGGCGGTGATGTGTTTTCAGATGATACAATGGACTACGGGTCTGATTGGTTGCATAGGGGGGAGCTTAGCACTGGGCAGGATGCTATTTCAGACGATTCATTGGGTACCTGTTCTCTTCAGCTGCGCAGAAAGACTCCTAAAGGCAAGTATGTTAAATACATTATAGAAGAAGACATGATTTCTGATGACCAAAGCGAGGTTTGTTTTTGGAAGCAGAGAGGGAATATATCTAAAGGCAGACAAAGATCCCTTTCTGCTAAAAATAAAGATAATCGGGAGCACCATAGGCAGAAACAGCAACAAAAGAATCTGAGAAGCAAGCAAGACAAGCACCTTGCAGTAGAGAATACTATTTCTGATGACCAAATGGAGGGTCGTTTTTTCAAGTATCAAAGAAGGATTCCTAAAAGCAGGCAAGCCAAGTTCATCGGTGAGGAAGATGTAATGTCTGATGACCAGTTGAAGGATCACTTTCAGAAGCCCCAAAGAAGTACTCGAAGGATCAGGCAAAATAAATACAATGATAAAGATCTTATGGATGACTTGCCAAAAAATAATTTTTATATGCTATATAGAACTCGTAAAAGGAAGCAAGCTAAAGATATGGATGAGGACAGTATAGATTCAGATGATCAAATAGAGGATATTTTTCATCTGCAGCACAAAAGAACTCTTCAAAGTAAGCAATCTAAATCTCAGATTCTTCAACCAAAGAAACAAACTAATCCACTCCATTTGAGAAACAAGACATCCCGTCCTGTGAAACAAGGTGCTCCTACGCTAATGAAATCAAAGGCTGCTCGGCAGGCAAAGAATCAATCTGGATACTCAAAAGACTTAACATTACATGTGGAAGAGGAGGAAGATGGTGGACCTCGCACACGACTTAGGAAGAGAGTCCGAGAAAAAGAGTCTGAAGGAAACTTGAAAGAAAAGAGAATCAAAAGGGAAAAGGTGAAGAATACAACAGCTGCGAAGGTTTCAGTTGGCCATGCCAAAACAAAGGATGAGGAATCAGAATATCAGTGTGACATTGAGGGTTGTACCATGAGTTTTGGGTCTAAACAGGAGCTGTTGCAACATAAGAGAAACATTTGTCCTGTGAAAGGATGCGGAAAGAGTTTTTTTTCACACAAATATCTAGTGCAGCATCGTCGAGTTCATGAGGATGACCGCCCATTGAAGTGCCCTTGGAAAGGGTGTAAGATGAGTTTCAAGTGGGCATGGGCACGCACTGAGCACATTCGAGTCCACACTGGTGCTCGTCCTTATGTGTGCGCTGAGCCAGGGTGTGGGCAAACATTTAGATTTGTTTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATGCAACCAAGAAAAATTGTTGA 4599 0.4412 MAGSEEVLPWLKSLPVAPEYRPTTAEFQNPIAYISKIEKEASQYGICKIIPPLPPSPKKTATANLTRSRPTFTTRQQQIGFCPRRAQPVRRRVWHSGHHYSLREFEAKAKAFHKTYLNKNKPKPLELETLYWKATLDKPFSVEYANDMPGSAFSPLRASRDADYVGDTAWNMRAVSRGSDSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHFGAPKTWYGVPRDAAVAFEDVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFVGAGIPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRFAKDAAIRRASINYPPMVSHFQLLYDLGLAFCSRIPGGIRAEPRSSRLKYKRNGEGETVIKELFVQDVVENNDLLHTLSKGSAIVLLPRSSSDFSVCSKLRVGSQQLKVNPEFSLSVYDYERMDSPDFISDDLMFNRNHGIKQVKSFYSVKEKFVTLCERNRVLPFSSDGNIYPSSSKTLQGDSEKEKDQGDGLSDQRLFSCVTCGILSFSCVAIVQPREPAAKYLMSADCSFFNDWIVGSGVTSNKFANAHEDASIPKPRTYTGWTKQNAQHDSNGVPVQSVELHAQISDQNYKEALNSGREKGNTALALLASAYGNSSDTEEDQGRLDIALDGDELNVINHPSTNGSQEMSSMPSHFKDPHASPMVRVIGLDKGDDIHSRRMDNYEYYMHKRVEHIMTPFDYSVKSEDQDNTSGVAFRNTRAVPHLSLNRSQDTHTDEDSSRMHIFCLEHAVEAEQQLRPIGGAHIFLLCHPDYPKIEAEAKIVAEELRIGYTWKNTIYRQANREDEVRIQSALDSEEAIPGNGDWAVKLGINLFYSANLSRSALYIKQIPYNSVIYKAFGQSSPASSPTEPKVYQRRTNKHKKVVAGKWCGKVWMSNQVHPLLAKRDFEDVENETSLHGWPLPDEKIERSVSNHKSNTSTRKSGKKWKKSVQKGGSWEKSFAERDWLSDNSIEDKSNKYRRRILGSKQTRHVERDDTTSQGDYSPLPHHKKPISKHSESSGNDAVSDDLLDDDSCIQHRRRANTSEAKFVGGDVFSDDTMDYGSDWLHRGELSTGQDAISDDSLGTCSLQLRRKTPKGKYVKYIIEEDMISDDQSEVCFWKQRGNISKGRQRSLSAKNKDNREHHRQKQQQKNLRSKQDKHLAVENTISDDQMEGRFFKYQRRIPKSRQAKFIGEEDVMSDDQLKDHFQKPQRSTRRIRQNKYNDKDLMDDLPKNNFYMLYRTRKRKQAKDMDEDSIDSDDQIEDIFHLQHKRTLQSKQSKSQILQPKKQTNPLHLRNKTSRPVKQGAPTLMKSKAARQAKNQSGYSKDLTLHVEEEEDGGPRTRLRKRVREKESEGNLKEKRIKREKVKNTTAAKVSVGHAKTKDEESEYQCDIEGCTMSFGSKQELLQHKRNICPVKGCGKSFFSHKYLVQHRRVHEDDRPLKCPWKGCKMSFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHATKKNC* 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03203 1532 SMART JmjN_1 16 57 IPR003349 -
Phac3g03203 1532 FunFam Probable lysine-specific demethylase ELF6 10 337 - -
Phac3g03203 1532 MobiDBLite consensus disorder prediction 1154 1187 - -
Phac3g03203 1532 SMART cupin_9 164 333 IPR003347 -
Phac3g03203 1532 Pfam jmjN domain 18 51 IPR003349 -
Phac3g03203 1532 ProSiteProfiles Zinc finger C2H2 type domain profile. 1470 1499 IPR013087 -
Phac3g03203 1532 ProSiteProfiles JmjC domain profile. 164 333 IPR003347 -
Phac3g03203 1532 MobiDBLite consensus disorder prediction 1297 1371 - -
Phac3g03203 1532 MobiDBLite consensus disorder prediction 1159 1187 - -
Phac3g03203 1532 ProSitePatterns Zinc finger C2H2 type domain signature. 1442 1464 IPR013087 -
Phac3g03203 1532 MobiDBLite consensus disorder prediction 1356 1371 - -
Phac3g03203 1532 MobiDBLite consensus disorder prediction 1302 1333 - -
Phac3g03203 1532 Gene3D Classic Zinc Finger 1440 1524 - -
Phac3g03203 1532 ProSiteProfiles Zinc finger C2H2 type domain profile. 1500 1531 IPR013087 -
Phac3g03203 1532 SUPERFAMILY beta-beta-alpha zinc fingers 1480 1524 IPR036236 -
Phac3g03203 1532 ProSitePatterns Zinc finger C2H2 type domain signature. 1502 1526 IPR013087 -
Phac3g03203 1532 Gene3D Classic Zinc Finger 1389 1439 - -
Phac3g03203 1532 ProSiteProfiles JmjN domain profile. 17 58 IPR003349 -
Phac3g03203 1532 SUPERFAMILY Clavaminate synthase-like 96 338 - -
Phac3g03203 1532 MobiDBLite consensus disorder prediction 954 980 - -
Phac3g03203 1532 Coils Coil 1532 1532 - -
Phac3g03203 1532 FunFam Probable lysine-specific demethylase ELF6 1497 1526 - -
Phac3g03203 1532 SUPERFAMILY beta-beta-alpha zinc fingers 1440 1476 IPR036236 -
Phac3g03203 1532 MobiDBLite consensus disorder prediction 1006 1055 - -
Phac3g03203 1532 ProSiteProfiles Zinc finger C2H2 type domain profile. 1440 1469 IPR013087 -
Phac3g03203 1532 FunFam Probable lysine-specific demethylase ELF6 1467 1496 - -
Phac3g03203 1532 Pfam JmjC domain, hydroxylase 197 315 IPR003347 -
Phac3g03203 1532 PANTHER LYSINE-SPECIFIC DEMETHYLASE 9 1466 - -
Phac3g03203 1532 Gene3D Cupin 10 337 - -
Phac3g03203 1532 MobiDBLite consensus disorder prediction 1006 1024 - -
Phac3g03203 1532 ProSitePatterns Zinc finger C2H2 type domain signature. 1472 1494 IPR013087 -
Phac3g03203 1532 SMART c2h2final6 1417 1439 IPR013087 -
Phac3g03203 1532 SMART c2h2final6 1470 1494 IPR013087 -
Phac3g03203 1532 SMART c2h2final6 1440 1464 IPR013087 -
Phac3g03203 1532 SMART c2h2final6 1500 1526 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03203 Phac-Chr3 33032553 33042331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03203 1166 1530 C2H2 Transcription Factor Family AT3G48430 37.531 8.28e-68 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac3g03203 JmjC 9.7e-37 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03203 - - gmx:100775813 1908.26