Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03199 ATGGCTTCGAGTGAGGGGTTTCTGACGGACGGGCAGAGGGAACTGCTAAAAATTGCTAGTCAAAATGCGGAGATTCTGTCTTCGTCTCCAAAATCCCCGTCCTCCTTGCTATATGACCATCATGTGAAAGCCCCAGCTGGTGGTAAGGCACAAACCGCTGGGATAGCTGTGAGGCATGTGCGTCGGTCACACTCTGCGAAGTATGGGCGGGTGAAGAAAGATGGTGCTGGTGGTAAAGGCACTTGGGGGAAATTGCTTGATACTGATATTGTTTCTCACATAGATCGAAATGATCCAAATTATGACAGTGGCGAGGAACCCTATCAACTGGTTGGATCTACTGTTACCGACCCGTTGGATGAATTCAAGAAAGCAGTGGTATCCATCATAGAGGAATATTTTAGTAATGGGGATGTGGAATTGGCAGCATCTGACCTCAAAGAACTTGGCTCAAGTGAATACTATCCATACTTCATTAAACGCCTTGTGTCCATGGCAATGGACAGGCACGATAAGGAGAAAGAAATGGCTTCTGTTCTTCTTTCTGCATTGTATGCTGATGTCATCAGCCCTGCACAGATCAGGGATGGGTTTTTTATTCTTCTTGAATCTGCTGACGATCTTGCTGTGGATATACTGGATGCAGTTGATATTCTTGCATTATTCTTGGCACGGGCTGTTGTTGATGACATTCTTCCTCCAGCCTTTCTTGCCAGGGCAATGAAGGCACTTCCAGATTCATCCAAGGGAGTTCAGGTAATCCAGACTGCTGAAAAGAGTTATCTCTCAGCTCCACACCATGCAGAGCTTGTGGAAAGGCGATGGGGTGGTAGCACTCACATAACTGTTGAAGAAGTGAAGAAGAAGATAGCTGATTTACTTAGAGAATATGTGGGTAGTGGTGACACATTGGAAGCCTGTAGGTGTATACGTGAGTTGGGGGTTTCATTCTTCCATCATGAGGTTGTTAAGAGGGCTTTGGTACTTGCCATGGAGATTCGTTCAGCAGAACCTCTAATGTTGAAATTATTAAAAGAAGCAGCAGAAGAAGGACTTGTTAGTTCCAGCCAAATGGTGAAGGGTTTTTCTCGTTTGGCAGAATCCCTAGATGATCTTGCTCTTGATATTCCGTCAGCTAAGGCACTGTTTCAGTCATTTGTCCCTAAGGCAATATCTGAAGGATGGCTTGATGCTTCACTTACCAAACCTGCAACTGAAGATGGGGAAATACAAGTTGAAGACGAGCAGGTGAAGAAGTACAAAAAGGAATCTGTAACTATAATTCATGAGTATTTTCTTTCTGATGACATTCCTGAACTGATTCGAAGTCTTGAAGAAATTGGAGCTCCTGAGTTTAACCCTATATTTTTGAAGAAGTTAATAACTCTAGCTATGGATCGAAAGAACAGAGAAAAGGAAATGGCATCTGTACTGCTATCTGCACTTCACATAGAGATATTCTCAACTGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAACTGCGGAAGATACAGCACTGGATATACTGGACGCTTCAAATGAGCTTGCTCTGTTTTTAGCTCGGGCTGTTATTGACGATGTATTGGCCCCACTGAATTTGGAAGAAATTGGCAGCAGGTTGCCACCAAAGTGTAGTGGTAGTGAAACTGTGCGTATGGCTCGGTCACTCATAGCTGCTCGTCATGCTGGGGAGAGGCTATTGAGATGTTGGGGTGGAGGCACGGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGCTCTTGGAAGAGTACGAAAGTGGAGGGGTTGTCAGTGAAGCTTGCCAATGTATCCGTGACCTGGGAATGCCTTTCTTTAATCACGAGGTAGTGAAGAAAGCTTTGATTATGGCCATGGAGAAAAAGAATGATCGAATGCTAGATCTACTGCAGGAGTGCTATAGTGAGGGTCTGATCACCATTAATCAGATGACTAAAGGTTTCACCCGAATTAAGGATGGTCTTGATGATCTGGCTCTGGACATTCCAAACGCAAAGGAGAAATTTGGCTTCTATGTGGAGCATGCTCAGTCGAAGGGCTGGCTTCTACCATCTTTTGACTCGCCTACTACAGATGCCTAA 2109 0.4467 MASSEGFLTDGQRELLKIASQNAEILSSSPKSPSSLLYDHHVKAPAGGKAQTAGIAVRHVRRSHSAKYGRVKKDGAGGKGTWGKLLDTDIVSHIDRNDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSIIEEYFSNGDVELAASDLKELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFILLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARAMKALPDSSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVGSGDTLEACRCIRELGVSFFHHEVVKRALVLAMEIRSAEPLMLKLLKEAAEEGLVSSSQMVKGFSRLAESLDDLALDIPSAKALFQSFVPKAISEGWLDASLTKPATEDGEIQVEDEQVKKYKKESVTIIHEYFLSDDIPELIRSLEEIGAPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLETAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALIMAMEKKNDRMLDLLQECYSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFGFYVEHAQSKGWLLPSFDSPTTDA* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03199 702 SMART ma3_7 420 531 IPR003891 -
Phac3g03199 702 SMART ma3_7 286 397 IPR003891 -
Phac3g03199 702 SMART ma3_7 122 233 IPR003891 -
Phac3g03199 702 SMART ma3_7 583 692 IPR003891 -
Phac3g03199 702 SUPERFAMILY ARM repeat 417 575 IPR016024 -
Phac3g03199 702 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Phac3g03199 702 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Phac3g03199 702 Gene3D - 570 698 - -
Phac3g03199 702 Gene3D - 272 405 - -
Phac3g03199 702 SUPERFAMILY ARM repeat 579 695 IPR016024 -
Phac3g03199 702 ProSiteProfiles MI domain profile. 582 701 IPR003891 -
Phac3g03199 702 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Phac3g03199 702 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Phac3g03199 702 FunFam programmed cell death protein 4 113 264 - -
Phac3g03199 702 Pfam MA3 domain 584 691 IPR003891 -
Phac3g03199 702 Pfam MA3 domain 421 530 IPR003891 -
Phac3g03199 702 Pfam MA3 domain 122 233 IPR003891 -
Phac3g03199 702 Pfam MA3 domain 286 397 IPR003891 -
Phac3g03199 702 FunFam programmed cell death protein 4 409 563 - -
Phac3g03199 702 Gene3D - 410 563 - -
Phac3g03199 702 Gene3D - 114 262 - -
Phac3g03199 702 PANTHER PROGRAMMED CELL DEATH 4 5 696 IPR039778 GO:0045892
Phac3g03199 702 FunFam Programmed cell death protein 4 271 407 - -
Phac3g03199 702 SUPERFAMILY ARM repeat 282 403 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03199 Phac-Chr3 32803436 32808478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03199 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 33.000 1.62e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03199 - - gmx:100784244 1291.17