Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03197 ATGGATGGGAGGAGACATTCTGTGGATATTCCTATTTCCAAAACTCTTGTGGCACTGAGGAGAGTAAGGTCATTGAGGGATCCATCAACTAATGGTGTTAGCACACTCTCTCCTTTGATTGATAATGGAGATTGGGATAATGGTTCTAGTAATGGGGTTTCCCTGAGTTTGAGATTTCTGAAAGCTTCTCATGCTGATGATTTTGACGGTAATGGTTTTTCAAGATCAAACAGTTTAGACTTTAAGGGTCAGAGAGAGCAGGAAACTGCTGAGTTAGAATTGAAAATGTCGAACTCTAAGATGAACTATTGTGGGATTTCACGTCAGGAAGGGCAACGAAATGAGGAACTTGTGTACTCTAATCCTATGAAGCAAGGTATTTCTGGAGATAAATCGCCAAATGAAAGCTGTTGCAGTAACCGTGAAGGTGGAGGATTGGATTTGGTTGCCATCACGCCTCCATGTAATTATTTGACGGATGGGAAGTTATGCCGTTTATCATCTGCATTGAGAGCAGATCACTCAAAGTCAGCTAGAAAATTACTACTCAAGAATCAAATGAAGCCATCTGGAGTGGTGGGTGACATGGCAAGCCATGTAGGAAGTCAACAGTGCCTTTCTGTTTATGATTCTATCTCAGCTCATTGTGCCTTGGAACATGTCACTCAAGATGTTGACGCTTTAGAAAATCACCATGGATGTGGATTAAGGAGTTGTTGGTCAAAATCACCAAGGTTTAGAGAATCAAATCATCATTCTGAAACAGAAGGCCTTCCCTTGATATTGCATCACGCTAATGAAACGGACCTCAATGGACATAGAAACGTCAGACACATTGGTGGTGAAATTAGTCAAACTATGGAAACTCCTAGAAGTTTATCTGTGAAATTCAGGCCAAAATCTTTTGATGATTTGGTTGGACAAAATGTGATAGGTAAGTCTCTTTTGGGTGCTATCTGTAGAGGAAGGATAGCATCATTTTATCTCTTCCATGGTCCACGCGGCACGGGCAAGACCACAGCCTCTAGGATATTTGCTGCTGCACTGAATTGCCTATCCTCTGTGGAGCAAAAGCCTTGTGGTCTGTGTAGAGAATGCGTTTTGTTCTTTTCTGGAAGAAATAAAAATGTTAATGAAGTGGACTCTTTGAGAATCAATCGTGCAGAGAAAGTTAAATCCCTTGTTAAGCATGCATGCATTCCTCCAGTTTCCTCAAGTTTTAAAGTGGTCATTGTTGATGAGTGCCAGTTATTGCACGGGGAAACATGGGCGTGCCTTTTGAATAGTCTAGAGAACGTTTCTCCTCATGTGGTTTTTGTGATGATCACTCCTGATTTGGATAACCTTCCTCGGAGTGCAGTTTCCCGGGCTCAGAGGTATCACTTTGCAAAGATTAAAGATGCTGACATTGTAAGAAGATTGGAAAAAATTTCTGTCGAAGAAGGTCTTGAATCTGAACAAGTTGCTTTGGACTTCATTGCTGCTAGATCCTGTGGTTCTCTTAGGGATGCAGAAACTATGCTTGATCAACTGAGTTTGCTTGGTAAAAGGATCACAATTTCCTTAGTCCACGAGCTTACTGGGGTAATTTCTGATGATGAATTGCTTGATTTGCTGGACCTAGCTTTATCATCTGACACTTCAAATACAGTTATAAGAGCCCGGGAACTTGTCAGAACAAGGATAGATCCTTTACAACTTATATCACAGTTGGCAAATCTTATTATGGACATTCTGTCAGGGAAATGTGAACTTCGTGGTTCTGAAATAAAAACAGGATTTTATAATAGATATACCTCGGAAGCTGACCTGCAGAGACTAAGTCATGCATTAAGAATACTGTCTGAATCAGAGAAGCAGTTAAGAATTTCCAAGAATCAAACAACATGGTTCACTGCAGCTCTTCTACAGTTGAGCTCCGTAGAATATTCATCTGCGGATACAAATACTACGAAGTTGTGTACACGAGCTGCATCCATTAGAGATGGTGATATCTGCAGTACATCTCCTAAAGGGGACAGCTTGGAGCATCTTGCTACAACAGATCAATGTGGTGATAATTCATATAGGTTAGGAGTGCAGGAGGATCACAAAAGAACATTGGATTCTATATGGTATAAAGCAACTGAGATGTGTCTATCTAGAAGGCTCAGAACATTTCTCAGGAAACAGGGGAAGTTGTCTTCAGTTTGTATTGGTCAAGGCCGTGCAGTTGCTGAGTTGGAGTTCCGGCATCGTGACTATGTAAGTAGGGCTGAGAAGTCATGGAAGTTGATTGCAGGTTCTCTGCAGTTCATATTAGGCTGTAACCTTGAGCTCAGAATCCATTATGTTCCTTCTTGTACTTCAGATTCTATGTATGCTAAATTGAAGAGGTCATCGTTCAATTTCTTTGGTTGTTCCCGTAGAATTCGTTGGAAATCTTTATCATATAATGAACAAGGAAGTGAATCAGACTATGCTGAATACACCTCTCAAAAGCACATGATGAAGGATCAAACTCTAACTTGTTCCTCTGATTGTGAAACCCTGGTGCCACCATTTGAGTCCTGCCATGGAATTGGAATGCAGGTCATGACAACTTTGAGAAGTAGCGAAGGAAATGTGCTAAGCTCAGGGAAAATGTTTATGAATAGGCCAGATGGAGAGACTCCAAGAATTTCTTGTTCGAGAGTTGATTCTTGCATTGAAGAGGGATGCAATTATGAACACTTAGCTTCATCAACCCTTGATTTAGATGATCAGTCCGACTGTTTTCCTGGAACCCGCTGGCTTCAAAAAAAGTTTGGTTCTTCTTATGCACCACACCAGAAGGATTTTGTTTTATCTATCCCCAAGTTAAAATGTTCTGAGATTTGTAGATATGATCTTGAACCCTGTGTCTTTTCTCACCGTTCTAAGAACTGCACTCAAGCTTCTGAGGAGAATTGCTAG 2934 0.409 MDGRRHSVDIPISKTLVALRRVRSLRDPSTNGVSTLSPLIDNGDWDNGSSNGVSLSLRFLKASHADDFDGNGFSRSNSLDFKGQREQETAELELKMSNSKMNYCGISRQEGQRNEELVYSNPMKQGISGDKSPNESCCSNREGGGLDLVAITPPCNYLTDGKLCRLSSALRADHSKSARKLLLKNQMKPSGVVGDMASHVGSQQCLSVYDSISAHCALEHVTQDVDALENHHGCGLRSCWSKSPRFRESNHHSETEGLPLILHHANETDLNGHRNVRHIGGEISQTMETPRSLSVKFRPKSFDDLVGQNVIGKSLLGAICRGRIASFYLFHGPRGTGKTTASRIFAAALNCLSSVEQKPCGLCRECVLFFSGRNKNVNEVDSLRINRAEKVKSLVKHACIPPVSSSFKVVIVDECQLLHGETWACLLNSLENVSPHVVFVMITPDLDNLPRSAVSRAQRYHFAKIKDADIVRRLEKISVEEGLESEQVALDFIAARSCGSLRDAETMLDQLSLLGKRITISLVHELTGVISDDELLDLLDLALSSDTSNTVIRARELVRTRIDPLQLISQLANLIMDILSGKCELRGSEIKTGFYNRYTSEADLQRLSHALRILSESEKQLRISKNQTTWFTAALLQLSSVEYSSADTNTTKLCTRAASIRDGDICSTSPKGDSLEHLATTDQCGDNSYRLGVQEDHKRTLDSIWYKATEMCLSRRLRTFLRKQGKLSSVCIGQGRAVAELEFRHRDYVSRAEKSWKLIAGSLQFILGCNLELRIHYVPSCTSDSMYAKLKRSSFNFFGCSRRIRWKSLSYNEQGSESDYAEYTSQKHMMKDQTLTCSSDCETLVPPFESCHGIGMQVMTTLRSSEGNVLSSGKMFMNRPDGETPRISCSRVDSCIEEGCNYEHLASSTLDLDDQSDCFPGTRWLQKKFGSSYAPHQKDFVLSIPKLKCSEICRYDLEPCVFSHRSKNCTQASEENC* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03197 977 Gene3D - 283 463 IPR027417 -
Phac3g03197 977 FunFam DNA polymerase III subunit gamma/tau 466 528 - -
Phac3g03197 977 NCBIfam DNA polymerase III subunit gamma/tau 292 638 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Phac3g03197 977 Gene3D - 466 528 - -
Phac3g03197 977 SMART AAA_5 324 484 IPR003593 GO:0016887
Phac3g03197 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 294 515 IPR027417 -
Phac3g03197 977 CDD HLD_clamp_pol_III_gamma_tau 465 528 IPR045085 -
Phac3g03197 977 Pfam DNA polymerase III, delta subunit 309 465 - -
Phac3g03197 977 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 295 710 - -
Phac3g03197 977 SUPERFAMILY post-AAA+ oligomerization domain-like 535 636 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03197 Phac-Chr3 32794265 32800345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03197 296 590 Core DNA Replication Machinery Family AT1G21690 24.252 2.26e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03197 - - gmx:100812040 1104.35