Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03153 ATGACGACTAGGTTTAAGAAGAACAGGAAGAAGAGAGGCCATGTCAGCGCCGGGCACGGCCGTATCGGAAAGCACAGAAAGCATCCCGGAGGTCGCGGTAACGCCGGAGGTATGCATCACCACCGTATCCTCTTCGACAAATACCATCCAGGTTACTTCGGTAAGGAGGCCAAGGACAAGGCCACCGCCGACAAGGCGCCCTTGCTCGATGTCACCCAGTTCGGCTACTTTAAGGTTTTGGGTAAAGGGGTTTTGCCTCAGAACCAGCCTATCGTTGTGAAGGCCAAACTTATCTCCAAGATCGCTGAGAAGAAGATCAAGGAGGCCGGTGGCGCCGTTGTTCTCACCGCTTAG 354 0.5452 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKEAKDKATADKAPLLDVTQFGYFKVLGKGVLPQNQPIVVKAKLISKIAEKKIKEAGGAVVLTA* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03153 117 ProSitePatterns Ribosomal protein L15 signature. 78 110 IPR001196 GO:0003735|GO:0005840|GO:0006412
Phac3g03153 117 Hamap 50S ribosomal protein L15 [rplO]. 1 116 IPR030878 GO:0003735|GO:0006412|GO:0015934
Phac3g03153 117 MobiDBLite consensus disorder prediction 1 38 - -
Phac3g03153 117 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 68 114 IPR021131 -
Phac3g03153 117 Gene3D - 38 117 - -
Phac3g03153 117 SUPERFAMILY Ribosomal proteins L15p and L18e 6 116 IPR036227 -
Phac3g03153 117 PANTHER 60S RIBOSOMAL PROTEIN L27A 61 117 - -
Phac3g03153 117 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03153 Phac-Chr3 32453343 32454043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03153 1 117 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 69.863 2.90e-64 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03153 K02900 - gmx:100305936 199.519