Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03149 ATGATGGGTAACCCTAATCCTAACCCTAATCTTACGCCGGAGAAGGAAAAGAGCCTAGAGGAGCTGTTGGGTCCTATCTTGCTGGGAGAGCGCGTCATAAAACTGGCTCAGGAGGCGGAGTCTTCAAAGGTGGACTGCACGGAGCTGGCGCGGAAGGTGCAGGTGGTGTGCGACAACCTGCGCTCCGTCGTGCGTGTGGTGTCGGGGACGCAGTGCGTGAACGAGCGCCCCATACGTCGCATCGTCGGCGAGGTCACCAAAAACCTAGAGCGCACGTTAGCGTTCGTGCGCAAGTGCAAGAAACACGGCGCCGTCCTCCGCCAGGTCTTCTCCATGACCACCACCGCCGACTTCCGGAAGGTCTGGAACCTTCTAGAATCTTCCAACGGCGACATGGTGTGGCTCCTCAGCATCTTGGACTCCAAGGAGGGAACCAATGTCTCCCTTCCCCCCATCGCCAGCAACGACCCCATCCTTGCATGGGTCTGGACCTTCATCTACACTCTTCAATTGGGTCAGCCCAAGGACCGCGCTGAAGCGGCCACTGAACTTGGCTCCCTCGCCAAAGACAACGACCGTACAAAATTCATCATCTTGGAGGAAGGTGGAGTGCCCCCCCTCCTCAAGCTTCTCAAGGAAGCTTCTTCCCCTGATGCTCAGGTTGCTGCTGCCAATGCTCTTGTCAACGTTACTACTAATCAAGACAGGGTCGTTAGTTACGTCGTAGAGTCCCATGCTGCCCCTACTATTGTTCAGGTCCTTGGTGATTCCCCTATGAGGGTTCGTGTCTCTGTTGCCAATTTGGTCTCAGCTATGGCTGAGCAACATGAACTTGCTCGCGAGGAGTTGGTGAGGGCCAATGTGACTAGGCCCCTCGTGTCGTTGTTGTCCATGGATACTGTCCTTGCTGACCCCATGGCCGGTCGTGCTAGTATCCATTCGCTTGTTCTGAATTTGTCCAACGTTGGGGAAACAAACTCGGATGGGAATAGCCGTGGCTCCAGCCACCATCGGAGGGAGAGGGAAAGGGAAAGAGAGGTTGAGAGCCTGGAGCTGAGGAAGGAGGTCAAAATCAGTTGTGCTAAGGCTCTTTGGAAACTCTCCAAAGGGTGCCTTTCAAGTTGCAAGAAGATTACCGAGACTAAAGGTTTGCTTTGTCTTGCTAAGATTATTGAGTCTGAGAGTGGGGAATTGCAGCTTAATTGTCTTATGGCTGTCATGGAGATTGCTGCTGTGGCAGAGTCCAATGCTGATCTTAGAAGAGCTGCTTTTAAGCGAACTGCGCCTGCGGCAAAGGCGGTAATTGATCAGCTTTTGAGGGTGGTTCAGGAAGAGAGTAATTCGGCACTGGTGATTCCTGCCATTAAGGCAATTGGTTCCTTGGCCAGGAACTTTTCTGGAAAGGTTCCGCAAGTTCTTGGTCCTTTAGTTGCTCAGCTTGGTAACAGAGATGTTGATGTAGCCAGTGAGGCTGCCATTGCATTGGGAAAGTTTGTCAGCCCGGACAACTACAATTGTGTTGACCATTCTAAGGCAATACTTGAGCTTGAAGGGGTTCCGAAGCTAATGAGCCTGCTGCAGATAAATGATCGCCAACAAGTTCATGGCCTGAGATTACTTTGTTACCTTGCCTTAAATGTAGGTAACAGTAAGGTCCTTGAGCAAGAACGTGCCTTGAATACCTTAGAGAGGTTTTCTCGTCCTGTTCAAACACAATATCCTGATTTGAAGGACCTTTTTGCAAATGCTATACACCACCTCACTCTTTATCAGCCAGGAGCTCAATTGCACAGACAGCCCTTGGGGCTGTAA 1812 0.516 MMGNPNPNPNLTPEKEKSLEELLGPILLGERVIKLAQEAESSKVDCTELARKVQVVCDNLRSVVRVVSGTQCVNERPIRRIVGEVTKNLERTLAFVRKCKKHGAVLRQVFSMTTTADFRKVWNLLESSNGDMVWLLSILDSKEGTNVSLPPIASNDPILAWVWTFIYTLQLGQPKDRAEAATELGSLAKDNDRTKFIILEEGGVPPLLKLLKEASSPDAQVAAANALVNVTTNQDRVVSYVVESHAAPTIVQVLGDSPMRVRVSVANLVSAMAEQHELAREELVRANVTRPLVSLLSMDTVLADPMAGRASIHSLVLNLSNVGETNSDGNSRGSSHHRREREREREVESLELRKEVKISCAKALWKLSKGCLSSCKKITETKGLLCLAKIIESESGELQLNCLMAVMEIAAVAESNADLRRAAFKRTAPAAKAVIDQLLRVVQEESNSALVIPAIKAIGSLARNFSGKVPQVLGPLVAQLGNRDVDVASEAAIALGKFVSPDNYNCVDHSKAILELEGVPKLMSLLQINDRQQVHGLRLLCYLALNVGNSKVLEQERALNTLERFSRPVQTQYPDLKDLFANAIHHLTLYQPGAQLHRQPLGL* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03149 603 SMART arm_5 190 232 IPR000225 GO:0005515
Phac3g03149 603 SMART arm_5 276 369 IPR000225 GO:0005515
Phac3g03149 603 SMART arm_5 233 274 IPR000225 GO:0005515
Phac3g03149 603 SMART arm_5 506 545 IPR000225 GO:0005515
Phac3g03149 603 MobiDBLite consensus disorder prediction 331 345 - -
Phac3g03149 603 Gene3D - 342 598 IPR011989 -
Phac3g03149 603 Gene3D - 17 138 IPR036537 GO:0007166
Phac3g03149 603 Coils Coil 603 603 - -
Phac3g03149 603 Gene3D - 164 331 IPR011989 -
Phac3g03149 603 SUPERFAMILY ARM repeat 172 587 IPR016024 -
Phac3g03149 603 MobiDBLite consensus disorder prediction 323 345 - -
Phac3g03149 603 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 202 235 IPR000225 GO:0005515
Phac3g03149 603 FunFam Armadillo repeat only 2 334 587 - -
Phac3g03149 603 PANTHER ARMADILLO REPEAT ONLY 4 20 591 - -
Phac3g03149 603 Pfam Armadillo/beta-catenin-like repeat 195 231 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03149 Phac-Chr3 32428163 32432135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03149 173 297 U-box Gene Family AT2G28830 32.000 3.57e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03149 - - gmx:100813824 1020.38