Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03126 ATGCCTGTAAATCCATGGACCCTCTTCTTCTTATGCATTTCCCTTCTACTCCCATTCCATTTTCTCATAGTTGCTGCTGTGAACCAACAAGGGGAGGCTCTTCTATCATGGAAGAGAACCCTGAACGGGTCCCTGGAGGTATTGAGTAACTGGGACCCAGTTCAAGACACCCCATGTAGCTGGTATGGAGTGAGTTGCAACACGAAGAACGAAGTAGTACAGCTGGATCTGAGGTATGTGGATTTGCTTGGAAGACTGCCCAGTGATTTCACCTCATTTCTTTCCTTAAGCAGTCTGATCTTAGCCGGAACTAATCTCACGGGTTCAATTCCAAAAGAAATAGGTTACCTTGTGGAACTCAGCTACTTAGACTTAAGTGACAATGCCTTGAGTGGCGAAATACCAAGTGAGCTATGTTACTTGCCTAAACTCGAGGAACTCCATCTCAACTCCAATGACCTCGTGGGGTCCATTCCAGTTGCAATTGGGAACCTCACAAAGTTGCAGAAGCTGATCCTATATGACAACCAACTCAGCGGGGAAGTTCCTACCACCATCGGCAACCTTAAGAGACTTCAAGTGATAAGAGCAGGGGGAAACAAGAACCTGGAGGGTTCTTTACCACAAGAAATTGGCAACTGTTCTAGTTTAGTGATGTTGGGCCTTGCTGAAACAAGCCTCTCAGGTTCTCTGCCCCCAACTCTTGGCCTTCTGAAGAACCTTGAAACCATTGCCATTTACACTTCCTTACTCTCAGGTGAAATACCACCTGAACTTGGGGACTGCACAGGACTTCAAAACATATACCTTTACGAGAACTCTCTTACTGGATCCATACCAAGCAAGTTGGGAAACCTTAAGAATCTCGAAAACCTTCTACTGTGGCAGAACAACCTAGTTGGCACCATGCCCCCCGAGATTGGCGACTGCGAGCAGTTGTCAGTGATTGACGTGTCAATGAACTCACTTACCGGAAGCATTCCCAACACTTTCGGGAACTTGACATCATTGCAAGAGCTCCAACTCAGTGTGAACCAGATTTCGGGGGAGATTCCAGGAGAACTGGGGAAGTGTCAGCAACTCACACATGTGGAGCTTGACAACAATCTCATCACGGGTACCATACCTTCCGAATTAGGAAACCTTGCGAATCTAACGCTCTTGTTCTTATGGCACAACAAGCTGCAAGGTAACATTCCCTCTTCCCTTTCCAATTGTCAAAACCTAGAGGCTATTGATCTGTCACAGAATGGATTAACGGGTCCCATACCCAAGGGCATATTCCAGCTCAAGAATCTCAACAAGCTCTTGCTCCTATCCAATAATCTCTCGGGGAAAATCCCCTCTGAGATTGGGAATTGTTCTTCCCTAATTCGATTCCGAGCCAACGACAACAACATCACCGGGAATATTCCCTCGCAGATTGGGAATCTCAACAATTTGAATTTCCTCGACCTGGGTAACAATCGGATTTCCGGCAGTATCCCGGAGGAGATCTCCGGCTGCCGGAATCTTGCATTTCTTGATATACATTCCAACTTCCTCTCCGGAAACCTACCGGAAAGTTTGAGCCGGCTTAATGCGCTTCAGTTTCTCGATGTTTCCGATAACATGATCGAAGGTATACTGGACCCAACCGTCGGCGAACTCACCGCGCTCTCCAAGCTTGTTCTCGCGAAGAATCGAATCTCTGGCTCAATTCCTGGTCAAATCGGGTCTTGTTCCAAATTACAATTACTGGATCTCAGCAGCAACAATCTCTCCGGCCAAATCCCCGGCAGCATCGGCAACATTCCGGCATTGGAAATCGCTCTGAATCTGAGCCTGAACCAGCTATCTGGTGAGATCCCTCCGGAGTTTTCCGGATTGACAAAACTCGGAGTGATGGACATATCTCACAACGCTCTCAGCGGAAACCTTCAGTATCTCGCGGGACTGCAAAATCTGGTGGTGCTCAATATCTCGAATAACAAATTCTCGGGACGTGTTCCGGACACGCCTTTCTTCGCGAAGCTGCCGCTGAGTGTACTGGCGAGGAACCCTGCGCTGTGCTTTTCCGGCAACGAGTGCAGTGGCGACAGCGGCGGGAGGTCGGGACGGCGGGCGAGGGTAGCGCGCGTGGTGATGGTGGTCCTGCTGTGCACCGCGTGCGTGCTGCTCATGGCGGCGCTGTATGTCGTCGTCGCAGCGAAACGGCGAGGGGACCATGAAAACGACGTGGAGCTAGATGGAAAGGACAGCGACGTGGACATGGCCCCACCTTGGGAGGTGACCCTGTACCAGAAACTCGATTTGTCCATCTCTGACGTAGCAAAATGTCTCACTGCTGGCAACGTCATCGGCCAAGGTCGATCCGGCGTCGTTTATAGAGTCGACTTGCCGGGAACGGGACTCGCCATCGCGGTGAAGAAATTTCGGTTGTCGGAGAAATTCTCCGCTGCGGCATTCTCGTCGGAGATTGCCACGCTTGCGCGAATCCGTCACCGGAACATCGTGCGGCTGCTGGGTTGGGGGGCGAACAGGAGATCCAAGTTACTGTTCTACGATTATTTACCGAACGGTAACCTGGACACGCTGTTACACGAGGGGTGCACAGGATTAATTGATTGGGAGACGAGGCTCAAGATAGCGTTGGGCGTAGCTGAGGGCGTGGCTTACTTGCACCACGATTGCGTGCCTGCTGCTATCTTGCACCGGGACGTCAAGGCGCAGAACATTTTGTTAGGAGACAGATATGAGCCCTGTTTGGCGGATTTTGGTTTCGCTCGATTCGTGGAAGAGGATCACGCCTCCTTTTCGGTCAATCCACATTTCGCCGGCTCCTACGGTTACATTGCCCCTGAGTACGCTTGCATGCTTAAAATCACAGAGAAGAGCGACGTGTACAGCTTTGGCGTGGTCCTACTGGAGATAATAACGGGGAAAAGGCCAATGGATCCATCATTCCCGGATAGCCAACATGTTATTCAGTGGGTCAGGGACCACCTCAAGAGCAAGAAGGACCCGATCCAGGTTCTCGATTCCAAGCTCCAAGGCCATCCAGACACACAGATCCAAGAGATGCTACAAGCACTTGGTATTGCCCTCTTGTGCACAAGTAATCGTGCAGAGGATCGACCCACAATGAAAGATGTTGCAGCATTATTGAGAGAAATTCGTCACGATCCTCCACCAGGTGCTGAGCCCCACAAGCCCAAACCCAAAACAACTCAAGCTTCCTCCTATTCCTCCTCCTCTGTCACCCCTGCTCAGTTGTTGCTCCTACAATCTACTTCCAACTCCTCATCACTTGCTTATTCATCTTCCTCCGCAGCAGCCTACCTCCCTCCAAGGAATCAGTCCTGA 3345 0.5043 MPVNPWTLFFLCISLLLPFHFLIVAAVNQQGEALLSWKRTLNGSLEVLSNWDPVQDTPCSWYGVSCNTKNEVVQLDLRYVDLLGRLPSDFTSFLSLSSLILAGTNLTGSIPKEIGYLVELSYLDLSDNALSGEIPSELCYLPKLEELHLNSNDLVGSIPVAIGNLTKLQKLILYDNQLSGEVPTTIGNLKRLQVIRAGGNKNLEGSLPQEIGNCSSLVMLGLAETSLSGSLPPTLGLLKNLETIAIYTSLLSGEIPPELGDCTGLQNIYLYENSLTGSIPSKLGNLKNLENLLLWQNNLVGTMPPEIGDCEQLSVIDVSMNSLTGSIPNTFGNLTSLQELQLSVNQISGEIPGELGKCQQLTHVELDNNLITGTIPSELGNLANLTLLFLWHNKLQGNIPSSLSNCQNLEAIDLSQNGLTGPIPKGIFQLKNLNKLLLLSNNLSGKIPSEIGNCSSLIRFRANDNNITGNIPSQIGNLNNLNFLDLGNNRISGSIPEEISGCRNLAFLDIHSNFLSGNLPESLSRLNALQFLDVSDNMIEGILDPTVGELTALSKLVLAKNRISGSIPGQIGSCSKLQLLDLSSNNLSGQIPGSIGNIPALEIALNLSLNQLSGEIPPEFSGLTKLGVMDISHNALSGNLQYLAGLQNLVVLNISNNKFSGRVPDTPFFAKLPLSVLARNPALCFSGNECSGDSGGRSGRRARVARVVMVVLLCTACVLLMAALYVVVAAKRRGDHENDVELDGKDSDVDMAPPWEVTLYQKLDLSISDVAKCLTAGNVIGQGRSGVVYRVDLPGTGLAIAVKKFRLSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRSKLLFYDYLPNGNLDTLLHEGCTGLIDWETRLKIALGVAEGVAYLHHDCVPAAILHRDVKAQNILLGDRYEPCLADFGFARFVEEDHASFSVNPHFAGSYGYIAPEYACMLKITEKSDVYSFGVVLLEIITGKRPMDPSFPDSQHVIQWVRDHLKSKKDPIQVLDSKLQGHPDTQIQEMLQALGIALLCTSNRAEDRPTMKDVAALLREIRHDPPPGAEPHKPKPKTTQASSYSSSSVTPAQLLLLQSTSNSSSLAYSSSSAAAYLPPRNQS* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03126 1114 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Phac3g03126 1114 Gene3D Ribonuclease Inhibitor 604 691 IPR032675 -
Phac3g03126 1114 FunFam Putative LRR receptor-like serine/threonine-protein kinase 609 689 - -
Phac3g03126 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 27 200 - -
Phac3g03126 1114 ProSitePatterns Protein kinases ATP-binding region signature. 780 804 IPR017441 GO:0005524
Phac3g03126 1114 Gene3D Ribonuclease Inhibitor 359 603 IPR032675 -
Phac3g03126 1114 Gene3D Ribonuclease Inhibitor 199 357 IPR032675 -
Phac3g03126 1114 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Phac3g03126 1114 Pfam Leucine rich repeat 312 371 IPR001611 GO:0005515
Phac3g03126 1114 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Phac3g03126 1114 SMART LRR_typ_2 165 189 IPR003591 -
Phac3g03126 1114 SMART LRR_typ_2 117 141 IPR003591 -
Phac3g03126 1114 SMART LRR_typ_2 430 454 IPR003591 -
Phac3g03126 1114 SMART LRR_typ_2 646 670 IPR003591 -
Phac3g03126 1114 SMART LRR_typ_2 334 358 IPR003591 -
Phac3g03126 1114 SMART LRR_typ_2 382 406 IPR003591 -
Phac3g03126 1114 SMART LRR_typ_2 286 310 IPR003591 -
Phac3g03126 1114 SMART LRR_typ_2 478 502 IPR003591 -
Phac3g03126 1114 SMART LRR_typ_2 550 574 IPR003591 -
Phac3g03126 1114 SUPERFAMILY RNI-like 267 637 - -
Phac3g03126 1114 SMART LRR_sd22_2 117 149 - -
Phac3g03126 1114 SMART LRR_sd22_2 623 648 - -
Phac3g03126 1114 SMART LRR_sd22_2 574 600 - -
Phac3g03126 1114 SMART LRR_sd22_2 262 288 - -
Phac3g03126 1114 SMART LRR_sd22_2 478 501 - -
Phac3g03126 1114 SMART LRR_sd22_2 526 544 - -
Phac3g03126 1114 SMART LRR_sd22_2 165 191 - -
Phac3g03126 1114 SMART LRR_sd22_2 382 411 - -
Phac3g03126 1114 ProSiteProfiles Leucine-rich repeat profile. 480 502 IPR001611 GO:0005515
Phac3g03126 1114 ProSiteProfiles Protein kinase domain profile. 774 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03126 1114 Gene3D Transferase(Phosphotransferase) domain 1 851 1060 - -
Phac3g03126 1114 SUPERFAMILY L domain-like 45 372 - -
Phac3g03126 1114 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Phac3g03126 1114 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 345 1044 - -
Phac3g03126 1114 Gene3D Phosphorylase Kinase; domain 1 756 850 - -
Phac3g03126 1114 Pfam Protein kinase domain 777 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03126 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 851 1066 - -
Phac3g03126 1114 FunFam LRR receptor-like serine/threonine-protein kinase 763 850 - -
Phac3g03126 1114 SMART serkin_6 774 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03126 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Phac3g03126 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 424 - -
Phac3g03126 1114 MobiDBLite consensus disorder prediction 1053 1077 - -
Phac3g03126 1114 SUPERFAMILY Protein kinase-like (PK-like) 768 1079 IPR011009 -
Phac3g03126 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 425 519 - -
Phac3g03126 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 520 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03126 Phac-Chr3 32276595 32281360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03126 26 1104 Receptor kinase-like Gene Family AT5G56040 54.136 0.0 1118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac3g03126 Pkinase 4.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03126 - - gmx:100778064 1880.92