Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03100 ATGGACATTGAAGCAAACCTCACGGAAAACTATGCCTCTCAGCCAATGCATGTGCAAGAAAACTGCTTGAAACCCAGCATGGGGGATGAGCTTCCTTTTGGAGCTCCTTCCTCACAGGGTTTCTTGCAAGATTTTCATCATATTGATCAGTTTCCTGTGAATAATGGCTCCTCATCCAATCCCATTTTCGGGGTACACACTCCAAATTTTGATCCCTTTGATCATAATGTAAACTGTGAGTCTGCACCTCCTGATTTTGAAGTTTTTGAGTGCAAGCCTATTGCTGAGAGTAATGGTAGTGCACATGCTCATCTGATGCACAATTTCCAATATGTAGGTTATAGTTTGAACCTCCCTCGGACGAATCAAATGGATATGGTGGTGGCAAACCAAAGATACCTGCCCTTCAATGCTCTAGAAACCAAACCTTTGAATTTTGTTGTACCAGATGAAGTCTCATGCATATCCCCACCTAATTATTATAAGAGAGTTGGTTTGAATAAAAACCTTAGGGAGTCCCCAACAATTAGGAGAACATTCAAAGCTCGGAAGAAATCCAACATAGTGAAGGGGCAATGGACATCAGATGAAGACAGATTGTTGATTCAACTGGTCGACCAATATGGAGTGAGGAAGTGGTCCCACATAGCTCAGGCGTTGCCTGGGAGAATAGGGAAGCAATGCAGAGAACGATGGCATAACCATTTAAGACCAGACATTAAGAAGGACATATGGACTGAAGAAGAGGATAAGATACTGATCCAAGCTCATGCGGAGATAGGAAATAAGTGGGCAGAGATTGCAAAAAAATTGACTGGAAGAACTGAAAACTCCATCAAAAACCATTGGAACGCAACAAAGAGAAGACAATATTCCAAAAGAAAATGTCGTTCAAAGTACCCTAGAGGCTCTCTTCTTCAGGAATATATCAAGAGCTTGAACTTAGACCAAAATCCACCAATGGACTATCGAAAAAAATCTGCTAAAAATGGCAATGCTAAGACAAACAATAACGGCAAAGCAGCAGCTCAGCTCCTGTGTGTTGATCAATTCTGTCCCAATGGCCAGTTGGTGCCAAAGTATGATTTTAACGAGGTCCCAGATTTTTGTTTGGATGATAACTTGTTTGAAGAGGGGTGTAGCATTGATTCTCTGTTAGATAATATACGAAGTGCTTCTACTATGGATGACAAAGATTTTGATGGAAAAGTACAATGTGCTCCTACTATGGAGTGGAAGCAATCTCATCAAGGAGGCGTCATGCAGCGTGTTCATGTTGATGAGCATCATGAGACTGAGATGAGGGCACCAAATATGGGGATTGAAGTTAAGAAGGAGCTGGATTTGGTGGAGATGATATCACACCACGTTAATGAAAGTATTGGTATATAA 1392 0.4138 MDIEANLTENYASQPMHVQENCLKPSMGDELPFGAPSSQGFLQDFHHIDQFPVNNGSSSNPIFGVHTPNFDPFDHNVNCESAPPDFEVFECKPIAESNGSAHAHLMHNFQYVGYSLNLPRTNQMDMVVANQRYLPFNALETKPLNFVVPDEVSCISPPNYYKRVGLNKNLRESPTIRRTFKARKKSNIVKGQWTSDEDRLLIQLVDQYGVRKWSHIAQALPGRIGKQCRERWHNHLRPDIKKDIWTEEEDKILIQAHAEIGNKWAEIAKKLTGRTENSIKNHWNATKRRQYSKRKCRSKYPRGSLLQEYIKSLNLDQNPPMDYRKKSAKNGNAKTNNNGKAAAQLLCVDQFCPNGQLVPKYDFNEVPDFCLDDNLFEEGCSIDSLLDNIRSASTMDDKDFDGKVQCAPTMEWKQSHQGGVMQRVHVDEHHETEMRAPNMGIEVKKELDLVEMISHHVNESIGI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03100 463 SUPERFAMILY Homeodomain-like 187 283 IPR009057 -
Phac3g03100 463 PANTHER MYB PROTEIN-RELATED 169 329 - -
Phac3g03100 463 CDD SANT 245 287 IPR001005 -
Phac3g03100 463 ProSiteProfiles Myb-like domain profile. 237 287 IPR001005 -
Phac3g03100 463 FunFam Transcriptional activator Myb isoform A 189 242 - -
Phac3g03100 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 185 240 IPR017930 -
Phac3g03100 463 Gene3D - 189 242 - -
Phac3g03100 463 Pfam Myb-like DNA-binding domain 190 236 IPR001005 -
Phac3g03100 463 Pfam Myb-like DNA-binding domain 245 284 IPR001005 -
Phac3g03100 463 Gene3D - 244 305 - -
Phac3g03100 463 SMART sant 241 289 IPR001005 -
Phac3g03100 463 SMART sant 189 238 IPR001005 -
Phac3g03100 463 CDD SANT 193 236 IPR001005 -
Phac3g03100 463 ProSiteProfiles Myb-like domain profile. 185 236 IPR001005 -
Phac3g03100 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 241 291 IPR017930 -
Phac3g03100 463 FunFam Transcription factor MYB119 243 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03100 Phac-Chr3 32112719 32114433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03100 116 389 MYB Transcription Factor Family AT4G18770 54.296 2.67e-95 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g03100 Myb_DNA-binding 1.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03100 K09422 - gmx:100816653 781.171