Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03089 ATGGGTTTTTCCTCTCTCCACGTCTGCATGAACTCATCAGAACAATGGCTGCAGGGCACAATTCACGAAGAGAGTAGGGTGGATTCTTCTTCACCATCAGGCGACATGCTTCCATGCTCGAGACCGATGACAGAGAGGAGGCTAAGACCCTCACAAGATCAAGCCCTCAAGTGCCCTAGGTGTGAATCAACACACACCAAGTTCTGCTACTACAATAACTACAGTCTCACTCAGCCCAGGTACTTCTGCAAGACATGTAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATTCCTGTTGGAGGTGGTTGCAGAAAGAACAAGAAAGTTTCCACTAAGAAACATAATGACCACCAACCAGCTATTAACCAAAACCAAACACAACCTGCAGGACCCTCTTATATTCACAATCATAAAGATCTTCAACATTCCTTCTTGGATGTGCAGTTTTCCCACCTTAACAATTTACTTGGGACTAATGCTGGGGTACTGGGAAACCCTAATTTCATGGATAGTAAGTATAGCATGGGAATGCTAGAGAACCCTGGGCCTATTGACTTCATGGAAAGCGGGTTGGATGGTATGAATATGATGGGGGGTTCTACTAGGAGTTTGGATCTTGTTGAAAATAGTGATATGAGTGTGGGTGGTGGTGTTGGGCTTGGTGATATGAGTGGCGCCTACAATGGATTACCATTAAATTATCAAGGTCTTTCTACTGCAGCATTTGGAGGCATGTCCCTTGATGGAAGCATCAGCAATGTTGGAACTTATATAATGGACTCTTGCCAGCGACTTATGTTGCCCTATGAGGGAGGTCATAACATCCTTAACGGTTCAATTGATGTGAAGCCAAACCCTAAGCTGTTGTCCCTTGAATGGCATGATCAGGGTTGCTCTGATGCTGAAAAAGTGTCATTGGGATACCTTAACGGAGGATCATGGAGCGGCTATGGATCTTCTACAACAAACCCTTTGGTCTAG 987 0.4509 MGFSSLHVCMNSSEQWLQGTIHEESRVDSSSPSGDMLPCSRPMTERRLRPSQDQALKCPRCESTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTKKHNDHQPAINQNQTQPAGPSYIHNHKDLQHSFLDVQFSHLNNLLGTNAGVLGNPNFMDSKYSMGMLENPGPIDFMESGLDGMNMMGGSTRSLDLVENSDMSVGGGVGLGDMSGAYNGLPLNYQGLSTAAFGGMSLDGSISNVGTYIMDSCQRLMLPYEGGHNILNGSIDVKPNPKLLSLEWHDQGCSDAEKVSLGYLNGGSWSGYGSSTTNPLV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03089 328 MobiDBLite consensus disorder prediction 22 51 - -
Phac3g03089 328 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Phac3g03089 328 MobiDBLite consensus disorder prediction 22 37 - -
Phac3g03089 328 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
Phac3g03089 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 41 156 IPR045174 GO:0003700|GO:0006355
Phac3g03089 328 MobiDBLite consensus disorder prediction 106 131 - -
Phac3g03089 328 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03089 Phac-Chr3 32048536 32051031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03089 1 300 C2C2-Dof Transcription Factor Family AT5G62940 39.104 2.54e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac3g03089 zf-Dof 4.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03089 - - gmx:100815061 551.206