Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03078 ATGAAAGCTTATGAGAACGAATCTAAGAAGGGGTTCTGGAATGCGGAGGAAGACTCGGTTCTAACTAATTACATAAAAAAGCATGGAACTGGGAAGTGGAACCGGATTCCTAGAGTGACAGGGTTGAAGAGAAGCGGGAAAAGTTGCAGACTGAGATGGATGAATTATCTAACTCCTGATGTTAAGCGTGGAGATTTCTCAGAAGAAGAAGAAGACCTTGTTGTTCGGCTTCACAGTCTCCTTGGAAACAGGTGGTCTTTGATCGCGGGGAGGATTCCGGGAAGAACAGACAACCAGGTGAAGAACTTTTGGAACACTCATTTAAGCAAGAAGTTTGGTGTTGACAAGAAGAAAAGGAGAAGAGGTTGTGTGAGAGCAAAATATGTTCCTAGAGCTGAAGCAGAGGGTATTTGCAACAGTGCAACAAAGGGAATGAATGGTGAAGGTGATAAGCTTGTTGATGAAAGTTGGAGCGATGATCTAATGGACTTGGCAAGCATGCATGAGGCGATTATGACAGATGATTTTGGCTGTACCTTTTCTTTTCCTAATGCTGTGTTTGATCTATGCACTGATTCTTTTCACCACTCTTTCTTTGGCCTTTGA 606 0.429 MKAYENESKKGFWNAEEDSVLTNYIKKHGTGKWNRIPRVTGLKRSGKSCRLRWMNYLTPDVKRGDFSEEEEDLVVRLHSLLGNRWSLIAGRIPGRTDNQVKNFWNTHLSKKFGVDKKKRRRGCVRAKYVPRAEAEGICNSATKGMNGEGDKLVDESWSDDLMDLASMHEAIMTDDFGCTFSFPNAVFDLCTDSFHHSFFGL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03078 201 Gene3D - 10 62 - -
Phac3g03078 201 SMART sant 9 59 IPR001005 -
Phac3g03078 201 SMART sant 62 110 IPR001005 -
Phac3g03078 201 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Phac3g03078 201 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Phac3g03078 201 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Phac3g03078 201 Gene3D - 65 128 - -
Phac3g03078 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Phac3g03078 201 CDD SANT 13 57 IPR001005 -
Phac3g03078 201 CDD SANT 66 108 IPR001005 -
Phac3g03078 201 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Phac3g03078 201 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 125 - -
Phac3g03078 201 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Phac3g03078 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Phac3g03078 201 FunFam MYB-related transcription factor 9 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03078 Phac-Chr3 31964470 31966146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03078 5 156 MYB Transcription Factor Family AT5G40330 54.717 2.22e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g03078 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03078 K09422 - zju:107418407 217.624