Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03068 ATGAAGTCAAATGATGTTTTAATTCATCAAATTTTTGTTCTAATTCCATTGCGCTGTTATGGCCCCTCCTCCTTGTATGTTTGTAGAGATTTTGGGCGGCAGCAGAGGTATGCTCGTTTCTGTGGAAGAGTAGTTGTCCTTTCAATCCTTGTGTTGCTTCTCTATCCATTTCTGTGGGCTTGGACTGTAATTGGTACCCTGTGGTTCAGCAGTGCAAAGAACTGTTTGCCTGAAGATGGTCAAAAATGGGGATTTCTCATCTGGCTACTTTTTAGTTACTGTGGACTCCTTTGCATTGCTTGCATGTCTCTGGGAAAGTGGTTGACACGAAGACAAGCACATCTGCTGCGTGCTCAACAGGGTATCCCTGTATCTGAATATGGGGTTCTGGTTGACATGATCCGAGTGCCTGATTGGGCATTTGAAGCTGCTGGTCAGGAAACAAGGGGCATGGTACAAGATGCTGCGGCATATCATCCAGGACTTTACCTAACTCCAGCTCAGAGAGAAGCAGTTGAAGCTTTAATTCAGGAACTCCCAAAGTTCAGGTTAAAGGCTGTTCCTACTGATTGCAGTGAATGTCCCATCTGCTTAGAAGAGTTCTATGTAGGGAATGAGGTTCGAGGCTTGCCTTGTGCTCACAATTTTCATGTTGAATGCATTGATGAGTGGCTTAGGCTGAATGTGAAATGTCCTCGGTGCCGTTGCTCAGTATTCCCAAACCTTGATCTTAGTGCACTGTCCAATCTCCCTGCTGAGCCTGAGCGATCTTCTGCAAGTGTAGTGACAACAACCAGTTATGTGAGAGGCCAACCGTCTAGTCAAAGTTACCGGTTAAGATTGCAGGGCCTTCTGCGTCCAGTCCGTGCTGAAATTGCTGGCCCTGTTGGTGACATAGATAATGCGTTGGAAAATGCTGAGAACGGTTTTGTATCAATCGTGACTCACAATGCATCATCTGGAGACCACGTCTCTTCTGTCGAATGCGTGCCTGTCACCGTGAGACTTTCCTCTGCACAAAGTTAG 1026 0.462 MKSNDVLIHQIFVLIPLRCYGPSSLYVCRDFGRQQRYARFCGRVVVLSILVLLLYPFLWAWTVIGTLWFSSAKNCLPEDGQKWGFLIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQETRGMVQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLPAEPERSSASVVTTTSYVRGQPSSQSYRLRLQGLLRPVRAEIAGPVGDIDNALENAENGFVSIVTHNASSGDHVSSVECVPVTVRLSSAQS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03068 341 SUPERFAMILY RING/U-box 176 243 - -
Phac3g03068 341 Pfam Ring finger domain 193 235 IPR001841 -
Phac3g03068 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 163 240 IPR013083 -
Phac3g03068 341 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 28 318 IPR044793 GO:0004842|GO:0010182
Phac3g03068 341 SMART ring_2 194 234 IPR001841 -
Phac3g03068 341 ProSiteProfiles Zinc finger RING-type profile. 194 235 IPR001841 -
Phac3g03068 341 FunFam E3 ubiquitin-protein ligase SIS3 162 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03068 Phac-Chr3 31909210 31916266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03068 30 319 C3H Transcription Factor Family AT3G47990 73.720 1.23e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03068 K16284 - gmx:100812016 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03068 3 31909210 31916266 Phac3g03068 3 31909210 31916266 ECH