Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03063 ATGAAGAACACAAACACTACTATTACTGCTTCATCAAAACTTGATCGCAAAACTATTGAAAGAAACCGCAGAATCCACATGAAAGGTCTCTGCTTCAAGCTTGTTTCCATTATTCCTTCCAAGTACCTCAAACCAACCAAGGCCATGCTTTCCCAGCAGGACCAGCTTGATCTTGCAGCCACGTATATAAAGCATCTGAGAGAAAGAATAGAGAAACTGAAGGGGGAGAAGGAGCAAGCCATGAACATGATGAGAACAACCCAAACCAATAACGGGATTTTCAATATTGAGTCTCAGCTGCCTCTACTTGAGATAAAGGAGTTGGGTTCGGGCATCGAAGTGATGTTGATAAGTGGGGTGAATAAGAACTTCATGCTCTATGAAGTAATTAGTGTCCTTGAGGAAGAGGGTGTTGAAGTTGTCACTGCGAACTTCTCTACTGTTGCTAATAAGATATTTTACACAGTTCATGCTAAGGTTAAAATATCAAGAGTTGGCGTTGAGTCAACAAGGATATATCAAAGGCTTCAGGAATTGATTCAACCACTAGAAGCTGGTGGTACTTATCGTGATCGAAAGCAAAATTATTAA 591 0.4044 MKNTNTTITASSKLDRKTIERNRRIHMKGLCFKLVSIIPSKYLKPTKAMLSQQDQLDLAATYIKHLRERIEKLKGEKEQAMNMMRTTQTNNGIFNIESQLPLLEIKELGSGIEVMLISGVNKNFMLYEVISVLEEEGVEVVTANFSTVANKIFYTVHAKVKISRVGVESTRIYQRLQELIQPLEAGGTYRDRKQNY* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03063 196 Gene3D - 3 95 IPR036638 GO:0046983
Phac3g03063 196 Pfam Helix-loop-helix DNA-binding domain 16 67 IPR011598 GO:0046983
Phac3g03063 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 81 IPR036638 GO:0046983
Phac3g03063 196 FunFam Transcription factor bHLH162 3 93 - -
Phac3g03063 196 Coils Coil 63 90 - -
Phac3g03063 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 66 IPR011598 GO:0046983
Phac3g03063 196 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 6 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03063 Phac-Chr3 31889045 31889920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03063 1 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 33.161 1.00e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g03063 HLH 4.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03063 - - vun:114179389 330.102