Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03056 ATGTTAGAAAGGTCGTGCTCCAATTTGTCTGACTTGGTATCTGAGGACAGTTTGAATTCTCCTGGAACTCCACGAGATCTTCCTCAAACCCTGTCTACTCTTCTAGGAATTATGACTGATGTTGATGACAAAGTAAGGGACAATGATGATTCAAATGCTTTCTCATCAGAACAACATCAAAAGATCATTATAGTAGCAAATTTTCTCCCTCTCAATGCTCAAAAGGATAAAATGTCTGGCAAATGGTGCTTCACATATGATCAAGATTCAATCTTGTTGCCATTAAAGGATGGTCTCTCTTCTAACACTGAGGTTTTTTATGTGGGTTCTCTGAAGGTTGATGTTGATGTCAGTGAACAAGAGAATGTTTCTCTTCAGCTACAAGAGAAATTCAATTGCTTGCCTACCTTTATTCCTTCAGACCTACAGAAACAATTTTATGATGGATTCTGCAAGCGACATTTGTGGCCGCTATTCCATTACATGTTGCCCTTTAATCCAGGCGGCGGCAACCGCTTTGACAACTCACTGTGGAAAGCTTACGTTTCTGTTAACAAAATATTTGCTGATAAAGTCACGGAGGTCATTAATCCAGAGCTTGATTATGTATGGGTTCATGATTATCATCTCTTGGTTATTGCAACATTTCTACGGAAGCGATACAATTGGATCAAGCTAGGATTTTTTCTCCACTCTCCATTTCCTTCATCAGAAATTTACCGGGCTTTACCTGTCAGGAATGAAATTTTGAAAGCATTGCTTAATGTAGATTTAATTGGCTTTCATACATTTGATTATGCTCGCCACTTTCTTTCTTGCTGCAGTCAAATTCTTGGCTTAAAATATGAATCCAAAAGGGGTTACATCAAGCTTGAATACTTTGGCCGCATAATAGTAATTAAAATCTTGTCTATAGGGATTGATATGTGTCGACTTCAATCTGCCTTGAATCACCCTTCTTTTACATTCCATGTCAGAGAAATTTGCGAGAAGTTCAAGGGGAAAAAACTTATTCTTGGAGTTGATGATATGGACATTTTTAAAGGTATCAGCCTAAAGTTAATGGGCATTGAGCAACTCCTTCAGCAATATCCTGAATTTCAGGGTGAATTAATACTTGTTCAGATTGTAAATCCAGCAAGGAGTACTGGTAAGGATGTAGATGAGGCAAGGAATGAGGTGGACGTTATTGCCAACAGGATAAATACAAGTTTTGGTTTCCCAGATTATAAACCTGTCATCATCATGGATCGTCATGTTCCAATGTATGAGAAGGCATCCTACTATGCTTTAGCAGAATGTTGTATAGTGAATGCAGTGCGGGATGGTATGAATTTGGTTCCTTACGAGTACATTGTCTGCAGGGAGGGAAGTCCTAATAGGGATAAAGCTTTACATATTGGTTCTGATGCCCCTCGAACTAGTGCACTTGTTGTTTCTGAGTTTATTGGTTGTTCCCCGTTTCTAAGTGGGGCAATCAGGGTAAACCCATGGGATATTAATGCTTTTGCCAATGCACTGAATTTGGCAATCAGAATGCCCAGTGGAGAGAAACAGTTGCGGCATGAGAAACATTATCGATACATTAGCTCTCATGATGTAGCTTACTGGGCCAAAAGTTTTCTGCACGATCTTAAGCATTCATGCAAGGATCACCACAGCAAAAATTGCTGGGCGATAGGCCTTGGCCTTAATTTCAGAGTTTTGTCCCTTTCTCCTACTTTCAGGAAGCTTAACAAAAGCCATGCTGTTTCTTCATATAAAAGGACAAATTGCAGGGCATTATTTTTGGATTGTGACGACACAGTTGTCCCTTCCATTGATAATACCCCAAGTCCTGAAATTATAGATGTTCTAAATAACCTTTGCAGTGACCCTAAAAACATTGTTTTCATACTAAGTGGCAGGGGGAAAACCACACTCAGTGAATGTTTTTATCAGTGTCAGAATCTCTGTTTAGCAGCGGAGCATGGTTATTTTATAAAATGGAGTCAACAGTCAACTTGGGAAATGAATCATACAAATATAGTTTCTTCTTGGAAAGAGATTGTTGAACCTGTGATGAGAATGTATACTGAGGCAACCGAGGGCTCCTATGTAGAGACCAAAGAGAGTGCCTTGGTATGGCACTACTCTGATGCTGATCCGGAATTTGGAAGTTGGCAAGCCAAGCAGCTGTTGGATCACCTCGAGGATTTATTTTCAAACGAACCAGTAACAGTAAAGAAAGGAAAACACATTATTGAAGTCAAGTCACAGGGGATGACTAAAGGGTTAGTTGTAGAGGACATCCTGTCCAAGATGACCAAGGATGGAAAATCCCCAGATTTTGTACTGTGTATAGGGGATGATAGATCTGATGAGGATATGTTTGAGAGCCTGCTGAGTAAACTTTACAGTGAAACCTCTTCTACTGCACCAGAGATCTTTGCATGCACCGTTGGTCAAAAACCAAGTAAAGCTGGGTACTATTTAGATGATACTGAGGATGTGATGATGCTTCTTCGAGATCTTAGCATCGTTTCAGTGCCTAAACCAGCATGTCTTGAAGAAAACTCTGGTGGAGAAACAGAATCAGCCTTCTTCAAGAACGTCTGA 2598 0.3992 MLERSCSNLSDLVSEDSLNSPGTPRDLPQTLSTLLGIMTDVDDKVRDNDDSNAFSSEQHQKIIIVANFLPLNAQKDKMSGKWCFTYDQDSILLPLKDGLSSNTEVFYVGSLKVDVDVSEQENVSLQLQEKFNCLPTFIPSDLQKQFYDGFCKRHLWPLFHYMLPFNPGGGNRFDNSLWKAYVSVNKIFADKVTEVINPELDYVWVHDYHLLVIATFLRKRYNWIKLGFFLHSPFPSSEIYRALPVRNEILKALLNVDLIGFHTFDYARHFLSCCSQILGLKYESKRGYIKLEYFGRIIVIKILSIGIDMCRLQSALNHPSFTFHVREICEKFKGKKLILGVDDMDIFKGISLKLMGIEQLLQQYPEFQGELILVQIVNPARSTGKDVDEARNEVDVIANRINTSFGFPDYKPVIIMDRHVPMYEKASYYALAECCIVNAVRDGMNLVPYEYIVCREGSPNRDKALHIGSDAPRTSALVVSEFIGCSPFLSGAIRVNPWDINAFANALNLAIRMPSGEKQLRHEKHYRYISSHDVAYWAKSFLHDLKHSCKDHHSKNCWAIGLGLNFRVLSLSPTFRKLNKSHAVSSYKRTNCRALFLDCDDTVVPSIDNTPSPEIIDVLNNLCSDPKNIVFILSGRGKTTLSECFYQCQNLCLAAEHGYFIKWSQQSTWEMNHTNIVSSWKEIVEPVMRMYTEATEGSYVETKESALVWHYSDADPEFGSWQAKQLLDHLEDLFSNEPVTVKKGKHIIEVKSQGMTKGLVVEDILSKMTKDGKSPDFVLCIGDDRSDEDMFESLLSKLYSETSSTAPEIFACTVGQKPSKAGYYLDDTEDVMMLLRDLSIVSVPKPACLEENSGGETESAFFKNV* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03056 865 Gene3D - 673 753 - -
Phac3g03056 865 Pfam Glycosyltransferase family 20 61 546 IPR001830 GO:0003824|GO:0005992
Phac3g03056 865 NCBIfam HAD-IIB family hydrolase 595 793 IPR006379 -
Phac3g03056 865 MobiDBLite consensus disorder prediction 1 27 - -
Phac3g03056 865 FunFam Alpha,alpha-trehalose-phosphate synthase 315 530 - -
Phac3g03056 865 CDD GT20_TPS 61 546 IPR001830 GO:0003824|GO:0005992
Phac3g03056 865 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 550 - -
Phac3g03056 865 Gene3D Glycogen Phosphorylase B; 314 530 - -
Phac3g03056 865 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Phac3g03056 865 Pfam Trehalose-phosphatase 597 828 IPR003337 GO:0003824|GO:0005992
Phac3g03056 865 FunFam Trehalose-6-phosphate synthase 8 56 314 - -
Phac3g03056 865 Gene3D Glycogen Phosphorylase B; 52 313 - -
Phac3g03056 865 SUPERFAMILY HAD-like 593 838 IPR036412 -
Phac3g03056 865 Gene3D - 595 825 IPR023214 -
Phac3g03056 865 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 707 - -
Phac3g03056 865 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Phac3g03056 865 CDD HAD_TPP 594 833 - -
Phac3g03056 865 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 838 IPR001830 GO:0003824|GO:0005992
Phac3g03056 865 NCBIfam trehalose-phosphatase 593 837 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03056 Phac-Chr3 31802981 31805888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03056 1 861 Trehalose Biosynthesis Gene Families AT1G23870 60.648 0.0 1121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03056 K16055 - gmx:100808800 1399.42