Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03019 ATGTCCATCTCAATTCCCAACCGTCAATTGTTCATAGACGGTGACTGGAAAGCCCCAGCCCTCAGCAGACGGATTCCCATCATCAACCCATCCACACAACAGATCATCGGGGAGATTCCAGCCGCTACTAAGGAAGACGTCGACCTCGCCGTCGCCGCCGCCAAAGCCGCCCTCTCCCGCAACAAAGGCGCCGATTGGGCCTCTGCTTCTGGCGCTGTTCGGGCTCGCTATCTCCGCGCCATCGCTGCCAAGGTCACCGAGAAAAAACCCGAGCTCGCAAAACTCGAAGCCATCGATTGTGGAAAACCGCTGGATGAAGCCGCCTGGGACATTGACGATGTTGCTGGTTGCTTTGAGTTCTATGCTGATCTGGCTGAAAAATTGGACTCCAAGCAAAAGGCTCCGGTGTCTCTTCCCATGGACACATTCAAGAGTTACGTTCTTAAGGAGCCAATTGGGGTTGTAGGATTAATAACTCCCTGGAATTATCCTCTGTTGATGGCTACGTGGAAGGTTGCTCCTGCTCTGGCAGCGGGTTGTGCTGCAATATTGAAGCCCTCTGAGTTGGCATCTGTGACCTGCTTGGAGCTAGGTGAGATTTGCAAAGAAGTGGGGCTTCCTCCTGGTGTGTTGAACATTCTCACTGGATTAGGACCTGAAGCCGGTGCTCCATTAGCAGTCCATCCTGATGTCGATAAGGTTCAATTCCCTTCACTTCTTGGAACAATTGAAGTTCTATTCTATGGGGTTATTGCCTTTACTGGAAGCTCGGCAACTGGGAGCAAGATTATGGCGGCCGCAGCTCAGCTGGTCAAGCCCGTTTCACTAGAGCTAGGTGGAAAAAGTCCAATCATTGTCTTTGAGGATGTTGACCTTGACAAGGCTGCTGAATGGACCATCTTTGGTTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGCCTTATTGTTCATGAAAGTATAGCAACAGAATTTTTGAATAAGATTGCAAAATGGATAAAAAATATCAAAATTTCTGATCCCTTGGAAGAAGGTTGCAGACTAGGCCCTGTTGTTAGCGAGGGACAGGTTGTCAAAGACCCAACACAATTTCCTTCTTTATCTGGGTTTGGGACTGGCTGTGACGTCACAGGTGGAGTTATGGTCAACCTAAATGTATATGAAAAGGTATTGAAGTTTATCTCAAATGCCAAGAGTGAGGGTGCAACTATTTTTACTGGTGGGTCTCGCCCCGAGCATTTAAAGAAGGGATTCTTTGTTGAACCAACTGTCATAACTGATGTGACTACCTCCATGCAAATTTGGAGAGAAGAAGTATTTGGACCTGTTCTTTGTGTAAAAACATTTAGCACTGAGGAAGAAGCTATTGCTCTAGCAAATGACACTGTATATGGCTTAGGGTCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGAATTACCAAGGCTTTTAAGGCAGGAATTGTGTGGATTAATTGCTCTCAACCATGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGCAGCGGATTTGGTCGAGAACTAGGAGAATGGGGACTTGATAATTACTTAAGTGTGAAGCAAGTGACTCAGTACATCTCTGATGAACCGTGGGGCTGGTACCAGTCTCCTTCAAAGCTGTGA 1653 0.4731 MSISIPNRQLFIDGDWKAPALSRRIPIINPSTQQIIGEIPAATKEDVDLAVAAAKAALSRNKGADWASASGAVRARYLRAIAAKVTEKKPELAKLEAIDCGKPLDEAAWDIDDVAGCFEFYADLAEKLDSKQKAPVSLPMDTFKSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLAVHPDVDKVQFPSLLGTIEVLFYGVIAFTGSSATGSKIMAAAAQLVKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHESIATEFLNKIAKWIKNIKISDPLEEGCRLGPVVSEGQVVKDPTQFPSLSGFGTGCDVTGGVMVNLNVYEKVLKFISNAKSEGATIFTGGSRPEHLKKGFFVEPTVITDVTTSMQIWREEVFGPVLCVKTFSTEEEAIALANDTVYGLGSAVISNDLERCERITKAFKAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQSPSKL* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03019 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 377 503 IPR016163 GO:0016620
Phac3g03019 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 11 279 IPR016162 GO:0016491
Phac3g03019 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 504 532 IPR016162 GO:0016491
Phac3g03019 550 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 304 315 IPR016160 GO:0016491
Phac3g03019 550 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 276 283 IPR029510 GO:0016491
Phac3g03019 550 CDD ALDH_F10_BADH 27 534 - -
Phac3g03019 550 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 244 - -
Phac3g03019 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 280 359 IPR016163 GO:0016620
Phac3g03019 550 PANTHER ALDEHYDE DEHYDROGENASE 4 236 - -
Phac3g03019 550 SUPERFAMILY ALDH-like 45 534 IPR016161 GO:0016491
Phac3g03019 550 Pfam Aldehyde dehydrogenase family 250 359 IPR015590 GO:0016491
Phac3g03019 550 Pfam Aldehyde dehydrogenase family 378 532 IPR015590 GO:0016491
Phac3g03019 550 Pfam Aldehyde dehydrogenase family 21 236 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03019 Phac-Chr3 31576664 31582156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03019 1 548 Aldehyde Dehydrogenase Gene Family AT1G74920 73.905 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03019 K00130 - gmx:100170731 919.842