Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03003 ATGTCTCGCTCCTGCGCCGCTACAGACTCCGTTGCCTCTGGCGAGATCATGCTGTTCGGGGTTCGAGTCGTTGTCGATTCCATGAGGAAGAGCGTCAGCATGAACAACCTCTCACAGTACGAGCATCCGCAAGACGGTAACAACAATAACAACACCAACAACATCAAAAAGGAAGTTCTCACCGCAGGTTATGCCTCAGCCGATGATGCTGTTCCTCATAACTCCGTCCGTCACCGCGAGCGGGAGCGGAAGCGAGGAGTTCCGTGGACGGAGGAAGAGCACAAACTGTTTTTGGTTGGATTGCAGAAGGTAGGGAAAGGTGATTGGAGAGGAATCTCCAAAAACTACGTGAAAACACGCACTCCGACGCAGGTTGCGAGCCATGCTCAGAAGTACTTTCTCCGCAGAAGCAACCTCAATCGCCGTCGCCGTAGATCCAGCCTATTCGACATCACCACCGACACGGTCTCTGCAGTTCCAATGGAGGATGAACAGGTCCAGAATCAAGACTCCCTGTCTCATCCACAACCTGTGTGCCCTGCAATTCCTGAAACTAGCAAAAGTGGATTTCCAATGATGCCAGTTTATCAGTTTGGGGTTGGTTCTGGAGTGATTTCAGTCCAAGGTGAGAAACCATTAGAAGAACTCACTCTGGGACAAGGAAACATAGAACACAAGGTGCCAATCAATCTGGTCCGTGCAATTCCTGTTGTTGCAGATCTTAAAGCACCCACAGTGTCTGATATCATCACCCCAAGTTCTAGTTCTGCAGTTGACCTACCCACACTGTCCTTGGGGCTATCCTTCTCTTCTGACCAAAGGCAAACATCAACAAGACATTCTGCTTTACATGCCATACCATGTTTCAGCAATGGAGATAGCGTCATTAGTGTTGCTTGA 900 0.4956 MSRSCAATDSVASGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQDGNNNNNTNNIKKEVLTAGYASADDAVPHNSVRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAVPMEDEQVQNQDSLSHPQPVCPAIPETSKSGFPMMPVYQFGVGSGVISVQGEKPLEELTLGQGNIEHKVPINLVRAIPVVADLKAPTVSDIITPSSSSAVDLPTLSLGLSFSSDQRQTSTRHSALHAIPCFSNGDSVISVA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03003 299 ProSiteProfiles SANT domain profile. 84 137 IPR017884 -
Phac3g03003 299 ProSiteProfiles Myb-like domain profile. 81 133 IPR001005 -
Phac3g03003 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 137 IPR017930 -
Phac3g03003 299 PANTHER TRANSCRIPTION FACTOR KUA1 3 204 - -
Phac3g03003 299 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
Phac3g03003 299 SUPERFAMILY Homeodomain-like 83 138 IPR009057 -
Phac3g03003 299 CDD SANT 88 133 IPR001005 -
Phac3g03003 299 Gene3D - 87 139 - -
Phac3g03003 299 SMART sant 85 135 IPR001005 -
Phac3g03003 299 FunFam transcription factor MYB1R1 87 138 - -
Phac3g03003 299 NCBIfam myb-like DNA-binding domain, SHAQKYF class 84 135 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03003 Phac-Chr3 31454827 31457192 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac3g03003 Myb_DNA-binding 3.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03003 - - gmx:780536 414.461