Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02977 ATGGACGACGGCGATCCTTCCCTGTCCGATAAAGAGGAGGAGAACGATGAGGAAGACGTGGCGGACATTCTGTTGCGAATTCCGATCGTCGATGCTCCCATACTCATCTTCGTTTGCTTCCACAAGGCTTTTCGCTCTGAACTCGATCACCTTCGTCGCTTGGCGGAAACGGTGTCGTTGGAGGACGAGCCTCGCCGTTGCCAGCAAATGATCCTTCAGCTTCAACGCAGGTTCCAGTTTCTGAAACTAGCACATAAGTATCACTGTGCTGCGGAAGACGAGGTTATCTTTCATGCACTGGATGCTCATGTGAAAAATGTCGTTTGTACATATTCGCTTGAACATAAAAGCACCTCAGACCTTTTTGGATCTGTTTTTCACTCCTTGGAAGAGCTGATGATTCCTAAAGAGAATATTTCGAAGCTGTTCCAAGAACTCGTGTACAGTATTGGTATCTTGCAAACCTACATCTACAAACATATGCTGAAAGAAGAAAAGCAGGTTTTTCCCCTATTGATGCAGAAATTATCTACTGAAGAACAGGCCTCACTTGTGTGGCTATTCATATGTAGTGTTCCTATAATGTTTCTGGAGGAACTTTTTCCATGGATGGTATCCTTCCTTTCTGCAAGTAAGCAGTCAGAAGTTACCCAGTGTATAAATGAAATTGCACCAATGGAAACAGCACTGCAAGAGGTTTTGGTTTCTTGGCTTAGAAGCAACAAACAAACCTTTACTGAGACCTGTTTTCAGAGTGGAGAATTTCAAGGTGTTGATGGTTTCCTGCATATAGAAAGATCATATAGGAAAACCGAAGAAGTTTCAAGTCTAATGGAAGTGAATGGCCAAGAAATAGAAGATGGGGTCAACCAGGTTAATGTCCTTCATCTTTGGCATAATGCCATCAAGAAAGATTTGAAAGAAATTCTGAAAGAACTTTACCTACTAAGAAAATCAGGCTGTTTTCAGAATTTAGACTCAATACTTATCCAAGTGAAATTCTTTGCTGATGTCCTCATCTTCTACAGCAATGCTCTGAAGAAATTCTTTCATCCTGTACTGAGTAAATATGCTAATGGCTGGTTGTCCAAGTCTATTGAAACATTTCTAGGTGAAAGTAACATTGAAGATATACAACAACAGTTGCTATTCTATAACTCAGAAAGTGGAACATCTTTGAGCAAGTTCGTAGAGAAGCTTTGCCAAAAACTGGAATCATTTGTATCAGGAGTTAACAAACAATTTGCTTTTCAAGAAAATGAGGTATTTCCTATCTTTAGAGAGAACTGCAGAAAGGGAATGCAAGAGGGACTTCTAAGCTTGAGCCTACATATGATGCCTCTGGGGTTACTAAAATGTGTTATAACTTGGTTTTCAGTTAGATTGTCTGAAAAAGAGTCCAGGTCCATTCTCTATTGCATAAAGAAAGGAAACAATTCTGTCTGTAAAGCTTTTTCATCATTATTACATGAGTGGTTCCGCATTGGCTATTCAGGTAAAGCCTCTATTGAAAAATTCAGACTAGACTTGCAACATATGTTCAAAAGAAGATGCTTTATTTCACCTGAAGAAATTAAGGAAGCTCATAGATTTTCTTTCATAAATTCTGAGAAGCAGCCTCATAAAGTCTCTGACCAGAATTCTTTGTCCTGTTCTTCCTCATCTGGATCCAGTAATGTAAACAAGTATGAGATACCATACTCTACAGGAATTAATCTGCACATATTTTTTCCTGCTACAGTTGGGAAGTTACATCAGTATCCTGCATTACATGCAGCAGAACGATCTTCTATTTCCTTTCTTGATGATCCGAAACCAATTGACCTAATATTTTTCTTTCACAAAGCTATCAAGAAAGATTTGGAGTTCCTAGTTCTTGGCTCAGCCGAGCTAGAAAAAAATGATAAGTTGCTTACGGATTTCCAGAAACGATTCCATCTCATATATTTTCTTCATCAGATCCACAGTGATGCAGAGGATGAGATAGTTTTTCCAGCCTTGGAGGCAAGAGGAAAACTAAAAAACATTAGCCATGCTTACACTTTTGATCACAACCATGAAGTTGAACACTTCAATGAAATATCTCACATCCTTGATAAGATGTCTAGATTACATCTTTCAATTTCTACAATTGATTCAAATATAAAGGAGATGGGACTGCTAAGGTATCAGCATTTATGCAGGAAGCTGCAAGAAATGTGCAAATCAATGTATACATCGCTTTCCAATCATATAGACCGTGAGGAAATAGAAATTTGGCCTATAATTAGAAAATTCTTCACAAACCAGGAGCAAGGGAAGATCATGGGATGCATGCTTGGAAGAATAAAGGCAGAAATATTACAAGATATGATACCTTGGCTAATGGCATCTTTGACACAGGATGAACAACATGTTTCAATGTTCTTATGGTCCATGGCTACTAAAAATACAATGTTTGCTGAATGGTTAGGTGAATGGTGGGATGGGTACAGTTTAGCAAAGGTAACAGAGGGCTCAAAAGATGTCCCTCTTCAGCCTGTTGAGCCACTGGAGATTATATCCAAATATTTATCTGAAGAAATTCTAAATGAATTACAAGAATCATCATCTGCCAACAAAAGCATAATTTTTTTGGAGAAGGATCGTATTGGTGATAATGTTGAGCTGTCTAACTACAACCACAATGATAAAGTTAAGGTTCATAATGCAGAAAAAAATAATAATCAATGTTCAAAACGCACAAATCAATTTCTCAATGATGACAAACATGTTTGCAATGAGGTAGCAGATATCATAAATCCGGTAGCCAATGAAGGTAAGTCGTCTAAACTTTGTGACGAGTCTGGGCGTTATGAACGACTTTTGAAATTGAGCCAAGATGATTTGGAGACGGTGATAAGAAGGGTGTCTCGGGACACTTGCTTAGATCCTCAGAAAAGGTCGTACATAATACAGAACCTACTGATGAGCCGTTGGATTATTAAACAGCAGATCTCTTCTACTGAAGTCAATGTAAAAAATGATAATCTGGAATTTTCTGGAAAGCATCCATCATACAGGGATCCTCTAAAACTAGTCTACGGCTGTAAACACTACAAGAGGAATTGTAAGCTTTTGGCTCCATGTTGCAACCAACTTCATACCTGCATACACTGTCATAACGACGAATCAGATCATTCAATTGATAGAAAATCTATTACAAAGATGATGTGTATGAAGTGCTTGATGATTCAACCAATCAGTGCCACATGCTCAACAGTTTCTTGCAATTTATCGATGGCAAAATATTACTGCAGAATCTGCAAATTATTTGATGATGAAAGGGAAATTTACCATTGTCCTTATTGTAACCTGTGCCGAGTTGGAAAGGGTTTGGGTGTAGACTACTTTCACTGTATGAGTTGCAATGCGTGTATGTCCCGTTCTCTTATGACGCATACATGCAGGGAGAAACATTTAGAGGACAACTGTCCAATTTGTCATGAATATATCTTCACATCCTGCTCTCCTGTAAAAGCCCTCCCATGTGGTCACGTGATGCACTCAACATGTTTTCAGGTACTTGTATTTTTTTTTCCCTCTCCAACATCCACGGAGTACAGAAACAACTTTATTAGCATTTGTGATGGTACTTCCAGGAATATACAAGATTTAATTACATCTGCCCCATATGTAGCAAGTCACTCGGAGACATGCAGGTATATTTTAGGATGTTAG 3699 0.385 MDDGDPSLSDKEEENDEEDVADILLRIPIVDAPILIFVCFHKAFRSELDHLRRLAETVSLEDEPRRCQQMILQLQRRFQFLKLAHKYHCAAEDEVIFHALDAHVKNVVCTYSLEHKSTSDLFGSVFHSLEELMIPKENISKLFQELVYSIGILQTYIYKHMLKEEKQVFPLLMQKLSTEEQASLVWLFICSVPIMFLEELFPWMVSFLSASKQSEVTQCINEIAPMETALQEVLVSWLRSNKQTFTETCFQSGEFQGVDGFLHIERSYRKTEEVSSLMEVNGQEIEDGVNQVNVLHLWHNAIKKDLKEILKELYLLRKSGCFQNLDSILIQVKFFADVLIFYSNALKKFFHPVLSKYANGWLSKSIETFLGESNIEDIQQQLLFYNSESGTSLSKFVEKLCQKLESFVSGVNKQFAFQENEVFPIFRENCRKGMQEGLLSLSLHMMPLGLLKCVITWFSVRLSEKESRSILYCIKKGNNSVCKAFSSLLHEWFRIGYSGKASIEKFRLDLQHMFKRRCFISPEEIKEAHRFSFINSEKQPHKVSDQNSLSCSSSSGSSNVNKYEIPYSTGINLHIFFPATVGKLHQYPALHAAERSSISFLDDPKPIDLIFFFHKAIKKDLEFLVLGSAELEKNDKLLTDFQKRFHLIYFLHQIHSDAEDEIVFPALEARGKLKNISHAYTFDHNHEVEHFNEISHILDKMSRLHLSISTIDSNIKEMGLLRYQHLCRKLQEMCKSMYTSLSNHIDREEIEIWPIIRKFFTNQEQGKIMGCMLGRIKAEILQDMIPWLMASLTQDEQHVSMFLWSMATKNTMFAEWLGEWWDGYSLAKVTEGSKDVPLQPVEPLEIISKYLSEEILNELQESSSANKSIIFLEKDRIGDNVELSNYNHNDKVKVHNAEKNNNQCSKRTNQFLNDDKHVCNEVADIINPVANEGKSSKLCDESGRYERLLKLSQDDLETVIRRVSRDTCLDPQKRSYIIQNLLMSRWIIKQQISSTEVNVKNDNLEFSGKHPSYRDPLKLVYGCKHYKRNCKLLAPCCNQLHTCIHCHNDESDHSIDRKSITKMMCMKCLMIQPISATCSTVSCNLSMAKYYCRICKLFDDEREIYHCPYCNLCRVGKGLGVDYFHCMSCNACMSRSLMTHTCREKHLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFQVLVFFFPSPTSTEYRNNFISICDGTSRNIQDLITSAPYVASHSETCRYILGC* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02977 1232 Pfam Hemerythrin HHE cation binding domain 606 755 IPR012312 -
Phac3g02977 1232 CDD Hr-like 36 170 - -
Phac3g02977 1232 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 650 773 - -
Phac3g02977 1232 ProSiteProfiles Zinc finger CHY-type profile. 1016 1085 IPR008913 GO:0008270
Phac3g02977 1232 ProSiteProfiles Zinc finger CTCHY-type profile. 1087 1150 IPR017921 -
Phac3g02977 1232 SUPERFAMILY CHY zinc finger-like 1014 1080 IPR037274 GO:0008270
Phac3g02977 1232 CDD Hr-like 608 754 - -
Phac3g02977 1232 Gene3D nmb1532 protein domain like 288 440 - -
Phac3g02977 1232 Gene3D nmb1532 protein domain like 602 774 - -
Phac3g02977 1232 Gene3D nmb1532 protein domain like 32 189 - -
Phac3g02977 1232 CDD RING-H2_Pirh2-like 1150 1180 - -
Phac3g02977 1232 SUPERFAMILY Zinc hairpin stack 1088 1143 IPR037275 -
Phac3g02977 1232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1144 1184 IPR013083 -
Phac3g02977 1232 Pfam CHY zinc finger 1023 1097 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02977 Phac-Chr3 31301652 31312711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02977 599 825 C2H2 Transcription Factor Family AT3G18290 25.862 2.11e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02977 K16276 - gmx:100802706 2079.29