Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02975 ATGGGACACAAAAAGAGAAACTCTGCGCCGCGCACGAAACCATCCGCGGCGGCTTCTCCGGCGGTGCAATCCGGCGTCGGCGGAGCCGCCAACGGTTCCACCTCGCCGGACGCTGACGCTAGCAATGTTTCCGATCACAAACCACATAACCCTAGCAAGATCGAATTGACTCCGCCCCAATCCGAGGGTTCCGATTACTCCACAATCAAGCTCGAATGCGAGCGCGCCCTCACCACGCTCCGCCGCGGGAACCACAACAAGGCAATGAAGCTGTTGCGGGAGATTTGCTCCAGAGAGGAGGGTTCGCCTCACTCCGCTTTCGTCCACCGAGTTCACAGCCTCATGTGTTTCAAAACGGCGACGGTTATCACCGACCCAAGCTCGAAGCAGCGGCATTTGAAGAACGCGCTCGAGTCGGCGCGCCACGCGGTGGAGCTCATGCCGAATTCCGTTGAGTACGCGCATTTCCGTGCTACGGTGATGTTGGAGGCGGCAAGTGAAGGGAAAGATTACGAGGATGTGGTGCATGAGTGCGAGAGGGGGCTCGCTATCGAGAACCCCAGTGATCCTGCCAAGGAGACGTTGCAGGATGAGAGTGAGCAGAAAGCATCATCTACTGAGGAACGTATTGCGCACGTGCAGAATGAGTTGAGGCAGCTTATTCAGAAGTCGAATATAGCTTCCTTGTCTTCTTGGATGAAGAATTTGAGTAACGGGGAGGAGAGGTTTCGGTTGATTCCGATAAGGAGGACTCCAGAGGACCCCATGGAGGTGAGGCTGGTTCAGACTAGAAGGCCTAATGAGATCAAGAAGGTGACCAAGACGCCCGAGGAAAGACGGAAGGAAATTGAAGTGCGAGTGGCTGCTGCCAGGCTGTTGCAACAGAAGTCAGAGGCACCACAATCTCCGAATGAAGGAGATAGGGATGACAGACCATTGGATTCATCTGCAGGATCTGGTCAGAGGATTGGTGATAGGAGAAGGCATGGAAATGTGAGGAAGAGTGGTTTTACAACGGAAAGGATGAAATGGGTGCACTCCTATTGGAAGTCGGTTAGCGTAGATAGGAAGAAGAACTTTCTGAGGGTTAAAACATGTGATCTTAAGTTGCACTATGGGTCTTCGAAGGATACTTTGTCGAATGATATCTTGTCAGAGGCTTTGTCTTATGCTGAGGCCAATAAAACTTGGAAATTCTGGCCTTGCTGCAACTGTGAAGAGAAACATTACAACCCGGATTCTCATAGGCATCATGTTGTGCAGGAGCATATGGGGAGTCTGTCGCCACAAATGCAGAGACTTCTGCCCCAAAATGTGGATAGTGAATGGATTGAGATGATTCTTAATTGTTCATGGAAGCCTCTGGATGTCTTAGCTGCAGTTAGAATGCTTGATAATAAAGCAAGGTTCAAAAGTCCATCACTTCCTGAGGATTTATACTTGGATAATCATACTCTGGACTATAATGTTTGTTTTAAAGAAGCAAACAGCTCTTACATTGAGAAGGAAAGTTCAGGGGACACTCTTCGTAATTGTTTGGAAGAATGCAATAACCATTGTAAAATTATAGAAAATAATGTAAGAGAAGGTGTTGAAGACCAACTATCTGTGGCTGATCGCATTATTGATTGTTGGCCAGTATCTGATGATCCTGAGCGTGCAAAACTTCTGGGGAAGATTCATGCCATGTTTGAGACTCTTATTAGGCACAAATGTCTTGCTGCTAGTCATCTGAACAAGGTCATACAATTTACTATGGGTGAGATACAGGGTCTCGCTGCTGGTTCTCAACTTCTAAGTCATGGCGTGGACCAAACACCAATGTGCATATGCTTTCTAGGACCTTCACAGCTTAAGACAATCTTCCAATTTCTGCAGGAAATATCTCACGCATGTGGGTTGGCCAGAAATGCTGATAAAGGTAGTAGTCCCACAAATGATTTGCTGAATATCAGCCAAGGTCCCGAGATTAAAGACAAGATTGTACTCGATGGAGATGCATCACGACTCCTACTGGATGAGTGTTTACTGCAAACACAAGTCACTGCTGGTACAAATCAGGGGTCTGTCTTGGATGATGTGACCACCCCAAGGTCTCCTGATGGAATTTCATGCTATAACGATGCTTTTCTATCCTGGATATTTTCAAGTTCTCCTATTGGGGATCAAGTGACATCATGGCTGCGGATCAGAGAAGACAAAATAAATAAAGGAAAGGAAATTGTCCAGATGCTTGAGAAGGAGTTTTATCACCTACAGGGCCTATGTGAGAAAAAGGGTGAGCGTTTAAGTTATGAGGAAGCGCTGCAAACCGTAGAGGATCTATGTCTTGAAGAAGGTAAGAAGAGGGAAACTGTTGGGGAATTTGTTCAGCGAAGCTATGAATCTGTCTTAAGAAAGCGAAGAGAAGAGCTCATAGAGAGTGAGAATGATATGATGTATGTCAGCAACAGGTTTGAGTTGGATGCTATATCAAATGTTTTGCAAGAAGCAGAAGCAAGGAATGTCAATCAATTTGGTTATGAGGAAACTTATGCTGGTGTAACTTCTCAATTATGTGACTTGGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGACTACTTGCACCAAATGGATGGCTGTATAGAAAATGCTATTCAGAAACTGAAGGAGCATTTATCTATAGAGCTTAGCAAAATTGATGCCCGAATAATTAGAAGTGTCACAGAGATGCAGCAATTGGAATTCAAGCTTGGGCCTATTTCTGCTAATGATTATCGAGCAATATTGGTGCCTCTAGTGAAGTCGTACCTAAGGGCACTTTTGGAAGATTTGGCCGAGAAGGATGCAAGAGAGAAGTCTGATGCTGCAAGTGAAGCATTTTTGGCTGAACTTGCTTTAGATTCCAAGAAGGCTGTTAAAGGCGGAAGTGAGAGCACAAAACATGTCGAGAAAACAAAAGACAGGAAGAAGAATAAAGATCACAGAAAAGCAAGAGATATGAAGGCCACGGGTGATCATGTGCAGTTCTCAGTGGGATCTACAGTTCCCGATTCCAATCTAATTGCACCTGAAAGTGACTTCCTAGATCATGAGGTTGGTTCCATGAATGATGATGACTTAGAACAACTTGAAGAGGAATTTAGACGGAAAATTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAGTTCCAGCGAAGGATAGAAAATGAAGCCAAACAGAGGCATCTTGCAGAGCAACAAAAAAAGTCATCTGGGTTGTACTTAGAAGTGGAAGAAGATCTTCAAGATTGTCAAACAAAGGCAGATACTGATTCGGTAGATTCATACAAACACGTAAGAGAAACTGTGCAAGACCAGTTGGTACAGGATAATGGATCCCGAAGCAATCTGGATGGTGTTCTAACAACCACAACAAATGGTTCCATTTATTTGCATCAGTCAAAAGTTAAACAATCAGATTTGTCTAATGGAGTTGTTCGAGAGAATGGTCTACCTGTGTCTGATCGGCGTGCTGGAAAAAAACATAAACGGAGAAATTCTTCCAGACCAGTCGATGGAAAGATTGAATCTTTTTCTTCAGAAAAAGAGAATGCGGAGGACATGCATACTGATTCTCATTCGAGAGAGAAATCCAAATTTAATAACAGTCAGGACAATAATAATGTGTGGAAAAACAATGGATCAAATGTGATGAGAGAGTTGCCAGTAGAAGATGCAGAGGAGGAAAGATTCCAGGCTGATCTTAAAATTGCTGTGCGCCAAAGCCTGGACACGTTTCAAGCTCGGGGAAGTTTGCCTTCAGCTTCCAGTTTAAGGATGTCCCAGAGGGCTTCTTCAGTGTTAGATGGTGTTGATTGCTTGCCTGTAGAAGACCCAACTGATAATGTGAATGGGGCAACTTTGCTTGGTACTGGACTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTAAGACGGTTTCGAGTGGAATTTCTTGGCAGATCAAGAACAGAGCATGATCATGTGGGCAATCCTTGTGTTGTCTGTGCATTGTACGAAATCTTTACTGCACTGGACATCGCATCTAAGGATTCAAGGAGAGAAGCAGTTGCACCTACATCACTGCGGATTGCTCTAAGTAATCTGTATCCTCACAGTAGTTTCTTCCAGGAGGCCCAGATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCGTGGTTCAAGTGTTTCTGATGCAGAATCAGCTGAAACTAACTGCATGGGATCCTGGGATTGTGCAAATAGTAGTTGTATAGCACATTCACTTTTTGGAATGAACATTTTTGAACAAATGAACTGCTATCACTGTGGTCTTGAATCCAGACATATGAAATATACTTCCTTCTTTCACAATATAAATGCCAGTGCCCTCCGTGATATGAAGGAAAAGTCTCCTGCAAGTTTCTTCGATAATCTTTTGAATCTTGTGGAGATGAACCATCAGCTGGCTTGTGATCCAGAAGCTGATGGCTGTGGCAAGCTGAACCACATCCATCACTTTCTCTCAACTCCACCCCATGTTTTTATGACAGTCCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACAGCAACTCTGGCTGCCCTGAGCACCACGATCAATATCAGTGTCCTTTATGGTGGTTTAAATCTTGAATGCACCCATAACTTGGTGTCAGTGGTTTGCTACTATGGTCAGCACTACCATTGCTTTGCTTACAGCCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGGTAATTGGTGGATGGGGGGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4908 0.4413 MGHKKRNSAPRTKPSAAASPAVQSGVGGAANGSTSPDADASNVSDHKPHNPSKIELTPPQSEGSDYSTIKLECERALTTLRRGNHNKAMKLLREICSREEGSPHSAFVHRVHSLMCFKTATVITDPSSKQRHLKNALESARHAVELMPNSVEYAHFRATVMLEAASEGKDYEDVVHECERGLAIENPSDPAKETLQDESEQKASSTEERIAHVQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRTPEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSEAPQSPNEGDRDDRPLDSSAGSGQRIGDRRRHGNVRKSGFTTERMKWVHSYWKSVSVDRKKNFLRVKTCDLKLHYGSSKDTLSNDILSEALSYAEANKTWKFWPCCNCEEKHYNPDSHRHHVVQEHMGSLSPQMQRLLPQNVDSEWIEMILNCSWKPLDVLAAVRMLDNKARFKSPSLPEDLYLDNHTLDYNVCFKEANSSYIEKESSGDTLRNCLEECNNHCKIIENNVREGVEDQLSVADRIIDCWPVSDDPERAKLLGKIHAMFETLIRHKCLAASHLNKVIQFTMGEIQGLAAGSQLLSHGVDQTPMCICFLGPSQLKTIFQFLQEISHACGLARNADKGSSPTNDLLNISQGPEIKDKIVLDGDASRLLLDECLLQTQVTAGTNQGSVLDDVTTPRSPDGISCYNDAFLSWIFSSSPIGDQVTSWLRIREDKINKGKEIVQMLEKEFYHLQGLCEKKGERLSYEEALQTVEDLCLEEGKKRETVGEFVQRSYESVLRKRREELIESENDMMYVSNRFELDAISNVLQEAEARNVNQFGYEETYAGVTSQLCDLESGEEDEWRMKDYLHQMDGCIENAIQKLKEHLSIELSKIDARIIRSVTEMQQLEFKLGPISANDYRAILVPLVKSYLRALLEDLAEKDAREKSDAASEAFLAELALDSKKAVKGGSESTKHVEKTKDRKKNKDHRKARDMKATGDHVQFSVGSTVPDSNLIAPESDFLDHEVGSMNDDDLEQLEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQRHLAEQQKKSSGLYLEVEEDLQDCQTKADTDSVDSYKHVRETVQDQLVQDNGSRSNLDGVLTTTTNGSIYLHQSKVKQSDLSNGVVRENGLPVSDRRAGKKHKRRNSSRPVDGKIESFSSEKENAEDMHTDSHSREKSKFNNSQDNNNVWKNNGSNVMRELPVEDAEEERFQADLKIAVRQSLDTFQARGSLPSASSLRMSQRASSVLDGVDCLPVEDPTDNVNGATLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRTEHDHVGNPCVVCALYEIFTALDIASKDSRREAVAPTSLRIALSNLYPHSSFFQEAQMNDASEVLAVIFDCLHRSFTRGSSVSDAESAETNCMGSWDCANSSCIAHSLFGMNIFEQMNCYHCGLESRHMKYTSFFHNINASALRDMKEKSPASFFDNLLNLVEMNHQLACDPEADGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTTINISVLYGGLNLECTHNLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKVIGGWGDVLTMCERGHLQPQVLFFEAVN* 1636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02975 1635 MobiDBLite consensus disorder prediction 191 208 - -
Phac3g02975 1635 MobiDBLite consensus disorder prediction 292 334 - -
Phac3g02975 1635 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1302 1634 IPR028889 -
Phac3g02975 1635 MobiDBLite consensus disorder prediction 183 208 - -
Phac3g02975 1635 MobiDBLite consensus disorder prediction 1180 1211 - -
Phac3g02975 1635 Pfam Protein of unknown function (DUF629) 345 878 IPR006865 -
Phac3g02975 1635 MobiDBLite consensus disorder prediction 1151 1226 - -
Phac3g02975 1635 CDD Peptidase_C19 1393 1632 - -
Phac3g02975 1635 Gene3D Cysteine proteinases 1293 1633 - -
Phac3g02975 1635 MobiDBLite consensus disorder prediction 1212 1226 - -
Phac3g02975 1635 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Phac3g02975 1635 MobiDBLite consensus disorder prediction 302 334 - -
Phac3g02975 1635 SUPERFAMILY Cysteine proteinases 1302 1632 IPR038765 -
Phac3g02975 1635 Pfam Ubiquitin carboxyl-terminal hydrolase 1303 1610 IPR001394 GO:0004843|GO:0016579
Phac3g02975 1635 MobiDBLite consensus disorder prediction 1 65 - -
Phac3g02975 1635 Coils Coil 196 223 - -
Phac3g02975 1635 MobiDBLite consensus disorder prediction 26 41 - -
Phac3g02975 1635 MobiDBLite consensus disorder prediction 967 998 - -
Phac3g02975 1635 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1634 - -
Phac3g02975 1635 Coils Coil 1031 1072 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02975 Phac-Chr3 31275072 31284300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02975 65 1632 C2H2 Transcription Factor Family AT3G47890 55.235 0.0 1642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02975 - - gmx:100799759 2807.71