Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02973 ATGGGACACAAAAAGAGAAACTCTGCGCCGCGCACGAAACCATCCGCGGCGGCTTCTCCGGCGGTGCAATCCGGCGTCGGCGGAGCCGCCAACGGTTCCACCTCGCCGGACGCTGACGCTAGCAATGTTTCCGATCACAAACCACATAACCCTAGCAAGATCGAATTGACTCCGCCCCAATCCGAGGGTTCCGATTACTCCACAATCAAGCTCGAATGCGAGCGCGCCCTCACCACGCTCCGCCGCGGGAACCACAACAAGGCAATGAAGCTGTTGCGGGAGATTTGCTCCAGAGAGGAGGGTTCGCCTCACTCCGCTTTCGTCCACCGAGTTCACAGCCTCATGTGTTTCAAAACGGCGACGGTTATCACCGACCCAAGCTCGAAGCAGCGGCATTTGAAGAACGCGCTCGAGTCGGCGCGCCACGCGGTGGAGCTCATGCCGAATTCCGTTGAGTACGCGCATTTCCGTGCTACGGTGATGTTGGAGGCGGCAAGTGAAGGGAAAGATTACGAGGATGTGGTGCATGAGTGCGAGAGGGGGCTCGCTATCGAGAACCCCAGTGATCCTGCCAAGGAGACGTTGCAGGATGAGAGTGAGCAGAAAGCATCATCTACTGAGGAACGTATTGCGCACGTGCAGAATGAGTTGAGGCAGCTTATTCAGAAGTCGAATATAGCTTCCTTGTCTTCTTGGATGAAGAATTTGAGTAACGGGGAGGAGAGGTTTCGGTTGATTCCGATAAGGAGGACTCCAGAGGACCCCATGGAGGTGAGGCTGGTTCAGACTAGAAGGCCTAATGAGATCAAGAAGGTGACCAAGACGCCCGAGGAAAGACGGAAGGAAATTGAAGTGCGAGTGGCTGCTGCCAGGCTGTTGCAACAGAAGTCAGAGGCACCACAATCTCCGAATGAAGGAGATAGGGATGACAGACCATTGGATTCATCTGCAGGATCTGGTCAGAGGATTGGTGATAGGAGAAGGCATGGAAATGTGAGGAAGAGTGGTTTTACAACGGAAAGGATGAAATGGGTGCACTCCTATTGGAAGTCGGTTAGCGTAGATAGGAAGAAGAACTTTCTGAGGGTTAAAACATGTGATCTTAAGTTGCACTATGGGTCTTCGAAGGATACTTTGTCGAATGATATCTTGTCAGAGGCTTTGTCTTATGCTGAGGCCAATAAAACTTGGAAATTCTGGCCTTGCTGCAACTGTGAAGAGAAACATTACAACCCGGATTCTCATAGGCATCATGTTGTGCAGGAGCATATGGGGAGTCTGTCGCCACAAATGCAGAGACTTCTGCCCCAAAATGTGGATAGTGAATGGATTGAGATGATTCTTAATTGTTCATGGAAGCCTCTGGATGTCTTAGCTGCAGTTAGAATGCTTGATAATAAAGCAAGGTTCAAAAGTCCATCACTTCCTGAGGATTTATACTTGGATAATCATACTCTGGACTATAATGTTTGTTTTAAAGAAGCAAACAGCTCTTACATTGAGAAGGAAAGTTCAGGGGACACTCTTCGTAATTGTTTGGAAGAATGCAATAACCATTGTAAAATTATAGAAAATAATGTAAGAGAAGGTGTTGAAGACCAACTATCTGTGGCTGATCGCATTATTGATTGTTGGCCAGTATCTGATGATCCTGAGCGTGCAAAACTTCTGGGGAAGATTCATGCCATGTTTGAGACTCTTATTAGGCACAAATGTCTTGCTGCTAGTCATCTGAACAAGGTCATACAATTTACTATGGGTGAGATACAGGGTCTCGCTGCTGGTTCTCAACTTCTAAGTCATGGCGTGGACCAAACACCAATGTGCATATGCTTTCTAGGACCTTCACAGCTTAAGACAATCTTCCAATTTCTGCAGGAAATATCTCACGCATGTGGGTTGGCCAGAAATGCTGATAAAGGTAGTAGTCCCACAAATGATTTGCTGAATATCAGCCAAGGTCCCGAGATTAAAGACAAGATTGTACTCGATGGAGATGCATCACGACTCCTACTGGATGAGTGTTTACTGCAAACACAAGTCACTGCTGGTACAAATCAGGGGTCTGTCTTGGATGATGTGACCACCCCAAGGTCTCCTGATGGAATTTCATGCTATAACGATGCTTTTCTATCCTGGATATTTTCAAGTTCTCCTATTGGGGATCAAGTGACATCATGGCTGCGGATCAGAGAAGACAAAATAAATAAAGGAAAGGAAATTGTCCAGATGCTTGAGAAGGAGTTTTATCACCTACAGGGCCTATGTGAGAAAAAGGGTGAGCGTTTAAGTTATGAGGAAGCGCTGCAAACCGTAGAGGATCTATGTCTTGAAGAAGGTAAGAAGAGGGAAACTGTTGGGGAATTTGTTCAGCGAAGCTATGAATCTGTCTTAAGAAAGCGAAGAGAAGAGCTCATAGAGAGTGAGAATGATATGATGTATGTCAGCAACAGGTTTGAGTTGGATGCTATATCAAATGTTTTGCAAGAAGCAGAAGCAAGGAATGTCAATCAATTTGGTTATGAGGAAACTTATGCTGGTGTAACTTCTCAATTATGTGACTTGGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGACTACTTGCACCAAATGGATGGCTGTATAGAAAATGCTATTCAGAAACTGAAGGAGCATTTATCTATAGAGCTTAGCAAAATTGATGCCCGAATAATTAGAAGTGTCACAGAGATGCAGCAATTGGAATTCAAGCTTGGGCCTATTTCTGCTAATGATTATCGAGCAATATTGGTGCCTCTAGTGAAGTCGTACCTAAGGGCACTTTTGGAAGATTTGGCCGAGAAGGATGCAAGAGAGAAGTCTGATGCTGCAAGTGAAGCATTTTTGGCTGAACTTGCTTTAGATTCCAAGAAGGCTGTTAAAGGCGGAAGTGAGAGCACAAAACATGTCGAGAAAACAAAAGACAGGAAGAAGAATAAAGATCACAGAAAAGCAAGAGATATGAAGGCCACGGGTGATCATGTGCAGTTCTCAGTGGGATCTACAGTTCCCGATTCCAATCTAATTGCACCTGAAAGTGACTTCCTAGATCATGAGGTTGGTTCCATGAATGATGATGACTTAGAACAACTTGAAGAGGAATTTAGACGGAAAATTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAGTTCCAGCGAAGGATAGAAAATGAAGCCAAACAGAGGCATCTTGCAGAGCAACAAAAAAAGTCATCTGGGTTGTACTTAGAAGTGGAAGAAGATCTTCAAGATTGTCAAACAAAGGCAGATACTGATTCGGTAGATTCATACAAACACGTAAGAGAAACTGTGCAAGACCAGTTGGTACAGGATAATGGATCCCGAAGCAATCTGGATGGTGTTCTAACAACCACAACAAATGGTTCCATTTATTTGCATCAGTCAAAAGTTAAACAATATTTGTCTAATGGAGTTGTTCGAGAGAATGGTCTACCTGTGTCTGATCGGCGTGCTGGAAAAAAACATAAACGGAGAAATTCTTCCAGACCAGTCGATGGAAAGATTGAATCTTTTTCTTCAGAAAAAGAGAATGCGGAGGACATGCATACTGATTCTCATTCGAGAGAGAAATCCAAATTTAATAACAGTCAGGACAATAATAATGTGTGGAAAAACAATGGATCAAATGTGATGAGAGAGTTGCCAGTAGAAGATGCAGAGGAGGAAAGATTCCAGGCTGATCTTAAAATTGCTGTGCGCCAAAGCCTGGACACGTTTCAAGCTCGGGGAAGTTTGCCTTCAGCTTCCAGTTTAAGGATGTCCCAGAGGGCTTCTTCAGTGTTAGATGGTGTTGATTGCTTGCCTGTAGAAGACCCAACTGATAATGTGAATGGGGCAACTTTGCTTGGTACTGGACTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTAAGACGGTTTCGAGTGGAATTTCTTGGCAGATCAAGAACAGAGCATGATCATGTGGGCAATCCTTGTGTTGTCTGTGCATTGTACGAAATCTTTACTGCACTGGACATCGCATCTAAGGATTCAAGGAGAGAAGCAGTTGCACCTACATCACTGCGGATTGCTCTAAGTAATCTGTATCCTCACAGTAGTTTCTTCCAGGAGGCCCAGATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCGTGGTTCAAGTGTTTCTGATGCAGAATCAGCTGAAACTAACTGCATGGGATCCTGGGATTGTGCAAATAGTAGTTGTATAGCACATTCACTTTTTGGAATGAACATTTTTGAACAAATGAACTGCTATCACTGTGGTCTTGAATCCAGACATATGAAATATACTTCCTTCTTTCACAATATAAATGCCAGTGCCCTCCGTGATATGAAGGAAAAGTCTCCTGCAAGTTTCTTCGATAATCTTTTGAATCTTGTGGAGATGAACCATCAGCTGGCTTGTGATCCAGAAGCTGATGGCTGTGGCAAGCTGAACCACATCCATCACTTTCTCTCAACTCCACCCCATGTTTTTATGACAGTCCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACAGCAACTCTGGCTGCCCTGAGCACCACGATCAATATCAGTGTCCTTTATGGTGGTTTAAATCTTGAATGCACCCATAACTTGGTGTCAGTGGTTTGCTACTATGGTCAGCACTACCATTGCTTTGCTTACAGCCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGGTAATTGGTGGATGGGGGGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4905 0.4412 MGHKKRNSAPRTKPSAAASPAVQSGVGGAANGSTSPDADASNVSDHKPHNPSKIELTPPQSEGSDYSTIKLECERALTTLRRGNHNKAMKLLREICSREEGSPHSAFVHRVHSLMCFKTATVITDPSSKQRHLKNALESARHAVELMPNSVEYAHFRATVMLEAASEGKDYEDVVHECERGLAIENPSDPAKETLQDESEQKASSTEERIAHVQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRTPEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSEAPQSPNEGDRDDRPLDSSAGSGQRIGDRRRHGNVRKSGFTTERMKWVHSYWKSVSVDRKKNFLRVKTCDLKLHYGSSKDTLSNDILSEALSYAEANKTWKFWPCCNCEEKHYNPDSHRHHVVQEHMGSLSPQMQRLLPQNVDSEWIEMILNCSWKPLDVLAAVRMLDNKARFKSPSLPEDLYLDNHTLDYNVCFKEANSSYIEKESSGDTLRNCLEECNNHCKIIENNVREGVEDQLSVADRIIDCWPVSDDPERAKLLGKIHAMFETLIRHKCLAASHLNKVIQFTMGEIQGLAAGSQLLSHGVDQTPMCICFLGPSQLKTIFQFLQEISHACGLARNADKGSSPTNDLLNISQGPEIKDKIVLDGDASRLLLDECLLQTQVTAGTNQGSVLDDVTTPRSPDGISCYNDAFLSWIFSSSPIGDQVTSWLRIREDKINKGKEIVQMLEKEFYHLQGLCEKKGERLSYEEALQTVEDLCLEEGKKRETVGEFVQRSYESVLRKRREELIESENDMMYVSNRFELDAISNVLQEAEARNVNQFGYEETYAGVTSQLCDLESGEEDEWRMKDYLHQMDGCIENAIQKLKEHLSIELSKIDARIIRSVTEMQQLEFKLGPISANDYRAILVPLVKSYLRALLEDLAEKDAREKSDAASEAFLAELALDSKKAVKGGSESTKHVEKTKDRKKNKDHRKARDMKATGDHVQFSVGSTVPDSNLIAPESDFLDHEVGSMNDDDLEQLEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQRHLAEQQKKSSGLYLEVEEDLQDCQTKADTDSVDSYKHVRETVQDQLVQDNGSRSNLDGVLTTTTNGSIYLHQSKVKQYLSNGVVRENGLPVSDRRAGKKHKRRNSSRPVDGKIESFSSEKENAEDMHTDSHSREKSKFNNSQDNNNVWKNNGSNVMRELPVEDAEEERFQADLKIAVRQSLDTFQARGSLPSASSLRMSQRASSVLDGVDCLPVEDPTDNVNGATLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRTEHDHVGNPCVVCALYEIFTALDIASKDSRREAVAPTSLRIALSNLYPHSSFFQEAQMNDASEVLAVIFDCLHRSFTRGSSVSDAESAETNCMGSWDCANSSCIAHSLFGMNIFEQMNCYHCGLESRHMKYTSFFHNINASALRDMKEKSPASFFDNLLNLVEMNHQLACDPEADGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTTINISVLYGGLNLECTHNLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKVIGGWGDVLTMCERGHLQPQVLFFEAVN* 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02973 1634 MobiDBLite consensus disorder prediction 191 208 - -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 1179 1210 - -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 292 334 - -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 1161 1225 - -
Phac3g02973 1634 CDD Peptidase_C19 1392 1631 - -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 1211 1225 - -
Phac3g02973 1634 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1301 1633 IPR028889 -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 183 208 - -
Phac3g02973 1634 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1633 - -
Phac3g02973 1634 Pfam Protein of unknown function (DUF629) 345 878 IPR006865 -
Phac3g02973 1634 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Phac3g02973 1634 SUPERFAMILY Cysteine proteinases 1301 1631 IPR038765 -
Phac3g02973 1634 Gene3D Cysteine proteinases 1292 1632 - -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 302 334 - -
Phac3g02973 1634 Coils Coil 1633 1634 - -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 1 65 - -
Phac3g02973 1634 Pfam Ubiquitin carboxyl-terminal hydrolase 1302 1609 IPR001394 GO:0004843|GO:0016579
Phac3g02973 1634 Coils Coil 196 223 - -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 26 41 - -
Phac3g02973 1634 MobiDBLite consensus disorder prediction 967 998 - -
Phac3g02973 1634 Coils Coil 1031 1072 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02973 Phac-Chr3 31275072 31284300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02973 65 1631 C2H2 Transcription Factor Family AT3G47890 55.235 0.0 1643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02973 - - gmx:100799759 2801.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02973 3 31275072 31284300 Phac3g02973 3 31275072 31284300 ECH