Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02972 ATGGGACACAAAAAGAGAAACTCTGCGCCGCGCACGAAACCATCCGCGGCGGCTTCTCCGGCGGTGCAATCCGGCGTCGGCGGAGCCGCCAACGGTTCCACCTCGCCGGACGCTGACGCTAGCAATGTTTCCGATCACAAACCACATAACCCTAGCAAGATCGAATTGACTCCGCCCCAATCCGAGGGTTCCGATTACTCCACAATCAAGCTCGAATGCGAGCGCGCCCTCACCACGCTCCGCCGCGGGAACCACAACAAGGCAATGAAGCTGTTGCGGGAGATTTGCTCCAGAGAGGAGGGTTCGCCTCACTCCGCTTTCGTCCACCGAGTTCACAGCCTCATGTGTTTCAAAACGGCGACGGTTATCACCGACCCAAGCTCGAAGCAGCGGCATTTGAAGAACGCGCTCGAGTCGGCGCGCCACGCGGTGGAGCTCATGCCGAATTCCGTTGAGTACGCGCATTTCCGTGCTACGGTGATGTTGGAGGCGGCAAGTGAAGGGAAAGATTACGAGGATGTGGTGCATGAGTGCGAGAGGGGGCTCGCTATCGAGAACCCCAGTGATCCTGCCAAGGAGACGTTGCAGGATGAGAGTGAGCAGAAAGCATCATCTACTGAGGAACGTATTGCGCACGTGCAGAATGAGTTGAGGCAGCTTATTCAGAAGTCGAATATAGCTTCCTTGTCTTCTTGGATGAAGAATTTGAGTAACGGGGAGGAGAGGTTTCGGTTGATTCCGATAAGGAGGACTCCAGAGGACCCCATGGAGGTGAGGCTGGTTCAGACTAGAAGGCCTAATGAGATCAAGAAGGTGACCAAGACGCCCGAGGAAAGACGGAAGGAAATTGAAGTGCGAGTGGCTGCTGCCAGGCTGTTGCAACAGAAGTCAGAGGCACCACAATCTCCGAATGAAGGAGATAGGGATGACAGACCATTGGATTCATCTGCAGGATCTGGTCAGAGGATTGGTGATAGGAGAAGGCATGGAAATGTGAGGAAGAGTGGTTTTACAACGGAAAGGATGAAATGGGTGCACTCCTATTGGAAGTCGGTTAGCGTAGATAGGAAGAAGAACTTTCTGAGGGTTAAAACATGTGATCTTAAGTTGCACTATGGGTCTTCGAAGGATACTTTGTCGAATGATATCTTGTCAGAGGCTTTGTCTTATGCTGAGGCCAATAAAACTTGGAAATTCTGGCCTTGCTGCAACTGTGAAGAGAAACATTACAACCCGGATTCTCATAGGCATCATGTTGTGCAGGAGCATATGGGGAGTCTGTCGCCACAAATGCAGAGACTTCTGCCCCAAAATGTGGATAGTGAATGGATTGAGATGATTCTTAATTGTTCATGGAAGCCTCTGGATGTCTTAGCTGCAGTTAGAATGCTTGATAATAAAGCAAGGTTCAAAAGTCCATCACTTCCTGAGGATTTATACTTGGATAATCATACTCTGGACTATAATGTTTGTTTTAAAGAAGCAAACAGCTCTTACATTGAGAAGGAAAGTTCAGGGGACACTCTTCGTAATTGTTTGGAAGAATGCAATAACCATTGTAAAATTATAGAAAATAATGTAAGAGAAGGTGTTGAAGACCAACTATCTGTGGCTGATCGCATTATTGATTGTTGGCCAGTATCTGATGATCCTGAGCGTGCAAAACTTCTGGGGAAGATTCATGCCATGTTTGAGACTCTTATTAGGCACAAATGTCTTGCTGCTAGTCATCTGAACAAGGTCATACAATTTACTATGGGTGAGATACAGGGTCTCGCTGCTGGTTCTCAACTTCTAAGTCATGGCGTGGACCAAACACCAATGTGCATATGCTTTCTAGGACCTTCACAGCTTAAGACAATCTTCCAATTTCTGCAGGAAATATCTCACGCATGTGGGTTGGCCAGAAATGCTGATAAAGGTAGTAGTCCCACAAATGATTTGCTGAATATCAGCCAAGGTCCCGAGATTAAAGACAAGATTGTACTCGATGGAGATGCATCACGACTCCTACTGGATGAGTGTTTACTGCAAACACAAGTCACTGCTGGTACAAATCAGGGGTCTGTCTTGGATGATGTGACCACCCCAAGGTCTCCTGATGGAATTTCATGCTATAACGATGCTTTTCTATCCTGGATATTTTCAAGTTCTCCTATTGGGGATCAAGTGACATCATGGCTGCGGATCAGAGAAGACAAAATAAATAAAGGAAAGGAAATTGTCCAGATGCTTGAGAAGGAGTTTTATCACCTACAGGGCCTATGTGAGAAAAAGGGTGAGCGTTTAAGTTATGAGGAAGCGCTGCAAACCGTAGAGGATCTATGTCTTGAAGAAGGTAAGAAGAGGGAAACTGTTGGGGAATTTGTTCAGCGAAGCTATGAATCTGTCTTAAGAAAGCGAAGAGAAGAGCTCATAGAGAGTGAGAATGATATGATGTATGTCAGCAACAGGTTTGAGTTGGATGCTATATCAAATGTTTTGCAAGAAGCAGAAGCAAGGAATGTCAATCAATTTGGTTATGAGGAAACTTATGCTGGTGTAACTTCTCAATTATGTGACTTGGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGACTACTTGCACCAAATGGATGGCTGTATAGAAAATGCTATTCAGAAACTGAAGGAGCATTTATCTATAGAGCTTAGCAAAATTGATGCCCGAATAATTAGAAGTGTCACAGAGATGCAGCAATTGGAATTCAAGCTTGGGCCTATTTCTGCTAATGATTATCGAGCAATATTGGTGCCTCTAGTGAAGTCGTACCTAAGGGCACTTTTGGAAGATTTGGCCGAGAAGGATGCAAGAGAGAAGTCTGATGCTGCAAGTGAAGCATTTTTGGCTGAACTTGCTTTAGATTCCAAGAAGGCTGTTAAAGGCGGAAGTGAGAGCACAAAACATGTCGAGAAAACAAAAGACAGGAAGAAGAATAAAGATCACAGAAAAGCAAGAGATATGAAGGCCACGGGTGATCATGTGCAGTTCTCAGTGGGATCTACAGTTCCCGATTCCAATCTAATTGCACCTGAAAGTGACTTCCTAGATCATGAGGTTGGTTCCATGAATGATGATGACTTAGAACAACTTGAAGAGGAATTTAGACGGAAAATTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAGTTCCAGCGAAGGATAGAAAATGAAGCCAAACAGAGGCATCTTGCAGAGCAACAAAAAAAGTCATCTGGGTTGTACTTAGAAGTGGAAGAAGATCTTCAAGATTGTCAAACAAAGGCAGATACTGATTCGGTAGATTCATACAAACACGACCAGTTGGTACAGGATAATGGATCCCGAAGCAATCTGGATGGTGTTCTAACAACCACAACAAATGGTTCCATTTATTTGCATCAGTCAAAAGTTAAACAATATTTGTCTAATGGAGTTGTTCGAGAGAATGGTCTACCTGTGTCTGATCGGCGTGCTGGAAAAAAACATAAACGGAGAAATTCTTCCAGACCAGTCGATGGAAAGATTGAATCTTTTTCTTCAGAAAAAGAGAATGCGGAGGACATGCATACTGATTCTCATTCGAGAGAGAAATCCAAATTTAATAACAGTCAGGACAATAATAATGTGTGGAAAAACAATGGATCAAATGTGATGAGAGAGTTGCCAGTAGAAGATGCAGAGGAGGAAAGATTCCAGGCTGATCTTAAAATTGCTGTGCGCCAAAGCCTGGACACGTTTCAAGCTCGGGGAAGTTTGCCTTCAGCTTCCAGTTTAAGGATGTCCCAGAGGGCTTCTTCAGTGTTAGATGGTGTTGATTGCTTGCCTGTAGAAGACCCAACTGATAATGTGAATGGGGCAACTTTGCTTGGTACTGGACTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTAAGACGGTTTCGAGTGGAATTTCTTGGCAGATCAAGAACAGAGCATGATCATGTGGGCAATCCTTGTGTTGTCTGTGCATTGTACGAAATCTTTACTGCACTGGACATCGCATCTAAGGATTCAAGGAGAGAAGCAGTTGCACCTACATCACTGCGGATTGCTCTAAGTAATCTGTATCCTCACAGTAGTTTCTTCCAGGAGGCCCAGATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCGTGGTTCAAGTGTTTCTGATGCAGAATCAGCTGAAACTAACTGCATGGGATCCTGGGATTGTGCAAATAGTAGTTGTATAGCACATTCACTTTTTGGAATGAACATTTTTGAACAAATGAACTGCTATCACTGTGGTCTTGAATCCAGACATATGAAATATACTTCCTTCTTTCACAATATAAATGCCAGTGCCCTCCGTGATATGAAGGAAAAGTCTCCTGCAAGTTTCTTCGATAATCTTTTGAATCTTGTGGAGATGAACCATCAGCTGGCTTGTGATCCAGAAGCTGATGGCTGTGGCAAGCTGAACCACATCCATCACTTTCTCTCAACTCCACCCCATGTTTTTATGACAGTCCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACAGCAACTCTGGCTGCCCTGAGCACCACGATCAATATCAGTGTCCTTTATGGTGGTTTAAATCTTGAATGCACCCATAACTTGGTGTCAGTGGTTTGCTACTATGGTCAGCACTACCATTGCTTTGCTTACAGCCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGGTAATTGGTGGATGGGGGGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4887 0.4414 MGHKKRNSAPRTKPSAAASPAVQSGVGGAANGSTSPDADASNVSDHKPHNPSKIELTPPQSEGSDYSTIKLECERALTTLRRGNHNKAMKLLREICSREEGSPHSAFVHRVHSLMCFKTATVITDPSSKQRHLKNALESARHAVELMPNSVEYAHFRATVMLEAASEGKDYEDVVHECERGLAIENPSDPAKETLQDESEQKASSTEERIAHVQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRTPEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSEAPQSPNEGDRDDRPLDSSAGSGQRIGDRRRHGNVRKSGFTTERMKWVHSYWKSVSVDRKKNFLRVKTCDLKLHYGSSKDTLSNDILSEALSYAEANKTWKFWPCCNCEEKHYNPDSHRHHVVQEHMGSLSPQMQRLLPQNVDSEWIEMILNCSWKPLDVLAAVRMLDNKARFKSPSLPEDLYLDNHTLDYNVCFKEANSSYIEKESSGDTLRNCLEECNNHCKIIENNVREGVEDQLSVADRIIDCWPVSDDPERAKLLGKIHAMFETLIRHKCLAASHLNKVIQFTMGEIQGLAAGSQLLSHGVDQTPMCICFLGPSQLKTIFQFLQEISHACGLARNADKGSSPTNDLLNISQGPEIKDKIVLDGDASRLLLDECLLQTQVTAGTNQGSVLDDVTTPRSPDGISCYNDAFLSWIFSSSPIGDQVTSWLRIREDKINKGKEIVQMLEKEFYHLQGLCEKKGERLSYEEALQTVEDLCLEEGKKRETVGEFVQRSYESVLRKRREELIESENDMMYVSNRFELDAISNVLQEAEARNVNQFGYEETYAGVTSQLCDLESGEEDEWRMKDYLHQMDGCIENAIQKLKEHLSIELSKIDARIIRSVTEMQQLEFKLGPISANDYRAILVPLVKSYLRALLEDLAEKDAREKSDAASEAFLAELALDSKKAVKGGSESTKHVEKTKDRKKNKDHRKARDMKATGDHVQFSVGSTVPDSNLIAPESDFLDHEVGSMNDDDLEQLEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQRHLAEQQKKSSGLYLEVEEDLQDCQTKADTDSVDSYKHDQLVQDNGSRSNLDGVLTTTTNGSIYLHQSKVKQYLSNGVVRENGLPVSDRRAGKKHKRRNSSRPVDGKIESFSSEKENAEDMHTDSHSREKSKFNNSQDNNNVWKNNGSNVMRELPVEDAEEERFQADLKIAVRQSLDTFQARGSLPSASSLRMSQRASSVLDGVDCLPVEDPTDNVNGATLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRTEHDHVGNPCVVCALYEIFTALDIASKDSRREAVAPTSLRIALSNLYPHSSFFQEAQMNDASEVLAVIFDCLHRSFTRGSSVSDAESAETNCMGSWDCANSSCIAHSLFGMNIFEQMNCYHCGLESRHMKYTSFFHNINASALRDMKEKSPASFFDNLLNLVEMNHQLACDPEADGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTTINISVLYGGLNLECTHNLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKVIGGWGDVLTMCERGHLQPQVLFFEAVN* 1629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02972 1628 MobiDBLite consensus disorder prediction 191 208 - -
Phac3g02972 1628 MobiDBLite consensus disorder prediction 292 334 - -
Phac3g02972 1628 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1295 1627 IPR028889 -
Phac3g02972 1628 MobiDBLite consensus disorder prediction 183 208 - -
Phac3g02972 1628 Pfam Protein of unknown function (DUF629) 345 878 IPR006865 -
Phac3g02972 1628 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1627 - -
Phac3g02972 1628 SUPERFAMILY Cysteine proteinases 1295 1625 IPR038765 -
Phac3g02972 1628 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Phac3g02972 1628 MobiDBLite consensus disorder prediction 302 334 - -
Phac3g02972 1628 Pfam Ubiquitin carboxyl-terminal hydrolase 1296 1603 IPR001394 GO:0004843|GO:0016579
Phac3g02972 1628 MobiDBLite consensus disorder prediction 1173 1204 - -
Phac3g02972 1628 MobiDBLite consensus disorder prediction 1155 1219 - -
Phac3g02972 1628 MobiDBLite consensus disorder prediction 1 65 - -
Phac3g02972 1628 CDD Peptidase_C19 1386 1625 - -
Phac3g02972 1628 MobiDBLite consensus disorder prediction 1205 1219 - -
Phac3g02972 1628 Coils Coil 196 223 - -
Phac3g02972 1628 Gene3D Cysteine proteinases 1286 1626 - -
Phac3g02972 1628 MobiDBLite consensus disorder prediction 26 41 - -
Phac3g02972 1628 MobiDBLite consensus disorder prediction 967 998 - -
Phac3g02972 1628 Coils Coil 1031 1072 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02972 Phac-Chr3 31275072 31284300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02972 65 1625 C2H2 Transcription Factor Family AT3G47890 55.157 0.0 1642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02972 - - gmx:100799759 2791.53