Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02957 ATGGCGGCTGGAAGGGCCTTTTCCGACATCACTACCTTCCTTCGCAACCAAACCGCTCCTCCCACTTCCCAACCTCTCGATTCTCTCTTCCTCTCTTCTTCCACTGCTTCTTTTCTTGGTTCGAGATCCATGATGAGTTTCGAAGGAGAAGGAGGGAAGGGGTGTAATGGTTCCTTCTTCCGCGCGTTTGATATAGACGAGAATGGAGATGAGTGCATGGACGAGTACTTTCATCAGCCTGAGAAGAAGCGCCGTCTCTCTGCCAACCAGGTTCAGTTCCTCGAGAAGAGCTTCGAGGAAGAGAACAAGCTTGAACCCGAGAGAAAAACCAAGTTAGCCAAAGACCTTGGTCTGCAGCCACGACAGGTCGCTATTTGGTTCCAGAACCGTCGTGCTCGGTGGAGGACCAAACAGCTCGAGAAGGATTACGAGATTCTGCATGACAGCTTTGAGAGTCTCAAGGCCAACTACGAAAGCCTCCTCAAGGAGAAAGACAAGTTGAAATCTGAGGTGGCGCACCTGAGTGAGAAGGTGGTTGCAAGAGAGAAAGAAGAGGAGCAGTTGAAGCAGGGTGAAAGGGGAACGAAGGGGTTGCAGGAACAGGATCAGGAACCACCCCAAAGGCCTATACTTGATTCAGTTTCGGAGGGTGAAGGATCCAAAGTGTCTTGCGTTGTTGGGGGTTGCAAACAGGAAGATATCAGTTCAGCCAGGAGTGACATTTTGGATTCCGATAGCCCGCATTACACGGATGGAGTTCACTCAGCAGTGCTAGAGCATGGTGATTCTTCTTATGTGTTTGAGCCTGATCAATCAGACATGTCACAAGATGAAGAAGACAACCTCAGCAAGAGTCTGTACCCTTCCTACCTCTTTCCCAAACTTGAAGATGCCGATTACTCCGACCCCACGGAAAGTTCTTGTAATTTTGGATTCTCGGAGGAAGATCATGCCCTTTGGACCTGGGAGTACTAA 975 0.4964 MAAGRAFSDITTFLRNQTAPPTSQPLDSLFLSSSTASFLGSRSMMSFEGEGGKGCNGSFFRAFDIDENGDECMDEYFHQPEKKRRLSANQVQFLEKSFEEENKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWRTKQLEKDYEILHDSFESLKANYESLLKEKDKLKSEVAHLSEKVVAREKEEEQLKQGERGTKGLQEQDQEPPQRPILDSVSEGEGSKVSCVVGGCKQEDISSARSDILDSDSPHYTDGVHSAVLEHGDSSYVFEPDQSDMSQDEEDNLSKSLYPSYLFPKLEDADYSDPTESSCNFGFSEEDHALWTWEY* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02957 324 SMART HOX_1 80 141 IPR001356 GO:0003677
Phac3g02957 324 PRINTS Lambda-repressor HTH signature 108 117 IPR000047 GO:0003677
Phac3g02957 324 PRINTS Lambda-repressor HTH signature 117 133 IPR000047 GO:0003677
Phac3g02957 324 Gene3D - 76 144 - -
Phac3g02957 324 MobiDBLite consensus disorder prediction 182 199 - -
Phac3g02957 324 SUPERFAMILY Homeodomain-like 69 139 IPR009057 -
Phac3g02957 324 Coils Coil 150 201 - -
Phac3g02957 324 MobiDBLite consensus disorder prediction 182 216 - -
Phac3g02957 324 Pfam Homeodomain 82 135 IPR001356 GO:0003677
Phac3g02957 324 ProSitePatterns 'Homeobox' domain signature. 112 135 IPR017970 GO:0000981|GO:0006355
Phac3g02957 324 CDD homeodomain 82 138 IPR001356 GO:0003677
Phac3g02957 324 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 69 236 IPR045224 GO:0003700
Phac3g02957 324 Pfam Homeobox associated leucine zipper 137 178 IPR003106 GO:0006355|GO:0043565
Phac3g02957 324 ProSiteProfiles 'Homeobox' domain profile. 77 137 IPR001356 GO:0003677
Phac3g02957 324 FunFam homeobox-leucine zipper protein ATHB-6-like 85 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02957 Phac-Chr3 31163958 31166302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02957 40 255 Homeobox Transcription Factor Family AT3G01470 43.636 1.49e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac3g02957 Homeodomain 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02957 - - gmx:100799054 521.546