Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02944 ATGTTGAAGCTTTTGGCTAGTAGAGCAGCTAGGGTTTCAACTTCACGCATTGCTACTTTCAGTTTCTCTAGTAGATGTGTTCATTCATTGCAATTTGCAACTGTAGAAGCAGAAGAGGTATCAGGTTCTAAGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTGGAATACAATTGTAGATCCCCTAAATGGAGACTCATTTATTAATGTTGCTGAAGTGGACGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACATGGTGTACACAACCCTTTCAAGGCACCAGAGAGATATCTCATGTATGGAGATATATCTACTAAGGCAGCTCACATGCTATCACTTCCAAAGGTTTCAGAATTTTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGCTACCAGCAGGCTTTTGCGGAAGTGTACGTGACACAGAAGTTTCTGGAGAATTTTTGCGGGGATCAGGTTCGTTTCCTAGCAAGGTCTTTTGCCGTACCTGGAAATCATCTTGGGCAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCCGTCCTTCAATTGATGGGTGCACTTTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTGCGCCTGCTTCATACCTGTGGCTTACCTGTGGAAGATGTAGACTTCATAAATTCAGATGGAAAGATAATGAACAAGCTGTTACTAGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCTGAGAAGTTGGCGGTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATGAGGAAGATTACACTGCGTGGGTATGTGATCAAGATGCATATGCATGCAGTGGTCAGAAATGCTCGGCCCAATCATTATTATTTATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGATGAAAGATCTTGCTGAAAGAAGAAAGCTGACAGACCTGACAATCGGCCCAGTCCTCACAGTTACTACTGATTCAATGCTTGAACATGTCAATAAGTTGCTTGAGATACCAGGATCAAAGCTGCTCTTCGGAGGTCGACCTTTGGAGGATCATTCAATTCCGTCTATTTATGGTGCAATTAAACCAACAGCTGTTTATGTTCCTCTTGAAGAAATTATGAAGGATAAGAATTTTGAGCTTGTGACAAAAGAAATATTTGGACCCTTTCAGATTATTACTGATTACAAAAATAGTGAACTATCAGTTGTATTGGATGCCTTGGAAAGAATGCATAACCATTTAACAGCTGCTGTAGTTTCAAACGATCCTTTATTTTTACAGGAAGTTATTGGCAAGTCGGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGAACAACTGGAGCACCACAGAATCACTGGTTTGGACCCGCTGGTGATGCAAGAGGTGCAGGAATTGGAACACCAGAGGCCATAAAACTTGTATGGTCTTGTCACAGAGAAGTTATCTATGATTATGGGCCGGTGCCAAAGAATTGGGAAATTCCTCCATCTACTTGA 1653 0.4138 MLKLLASRAARVSTSRIATFSFSSRCVHSLQFATVEAEEVSGSKPAEVLNLVQGKWVGSSNWNTIVDPLNGDSFINVAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSEFFTRLIQRVSPKSYQQAFAEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKIMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHEEDYTAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKMKDLAERRKLTDLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDKNFELVTKEIFGPFQIITDYKNSELSVVLDALERMHNHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREVIYDYGPVPKNWEIPPST* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02944 550 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 26 550 IPR044638 GO:0004029
Phac3g02944 550 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 324 335 IPR016160 GO:0016491
Phac3g02944 550 FunFam probable aldehyde dehydrogenase 41 299 - -
Phac3g02944 550 Pfam Aldehyde dehydrogenase family 119 492 IPR015590 GO:0016491
Phac3g02944 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 491 IPR016163 GO:0016620
Phac3g02944 550 SUPERFAMILY ALDH-like 50 497 IPR016161 GO:0016491
Phac3g02944 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 46 307 IPR016162 GO:0016491
Phac3g02944 550 FunFam Aldehyde dehydrogenase 12 307 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02944 Phac-Chr3 31073919 31081628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02944 1 550 Aldehyde Dehydrogenase Gene Family AT5G62530 79.354 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02944 K00294 - gmx:100806579 1039.25