Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02942 ATGGAGCTTGCTTCGGAGAGATCTGGTGACGGAGGAAGTGGACTCAAGGAAGAAAAGAGAAGTGATGACTATACTGTTGGTGATGCTGAAGATGCTCCTCATAAACAACAGATTATTGTCCAGGAAGCACCTGCAGCTAATACAGAAAGATCCAAACAGGAGGCTGGACCTAGCACATCCGCAGACAAAAAGGAAGAGGTTGATGATCAGCTTGAGAGCACGAAAGCTGAAATGGGTGTGGTGAGAGAAGAAAATCAGCGGTTAAAGAGGTCTTTGAACAAAATAATGAGTGAGTATCGGACACTAGAAATGCAATTTCAAGACGTACTTAAGCAAGGGACAAAAAGGAATAAAGGAAATGATAACCAAGAAGACACATTAGAGGAATCAGATCTAGTTTCTCTCAGTCTAGGAAGAGTTCCTAACAATCAAAGAAACGATGAGAAAATAAAAGTTTGTAAAAAATTGAAGGATGATGAAGGGTTTAACGAAGACTTGACTCTTGGACTGTGCAAATCAAAGTCAGGAAGTACAACTGAAGCTTTGCCTAATCCAAGCCCAGAAAACAGTTCTGAAGTTCCAAAGGAAGAAGCTGGGGAAACTTGGCCTCCCAGTAAGGAGACACAGAAGACAATTAGGGACACAGAGGATGAAGTTGCTCAGCAAAACCCTATGAAGAAGCCACGAGTTTGCGTTAGAGCAAGATGCGACACTCCAACAATGAATGATGGATGCCAGTGGAGGAAATATGGACAGAAGATCGCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACCATTGCCCCATCATGCCCTGTCAGAAAACAGGTGCAAAGATGCGTTGATGACATGTCCATTCTAATTACCACATATGAAGGGACCCACAACCACACTCTTCCACCTTCAGCTACAGCCATGGCATCCACAACTTCCGCAGCAGCATCCATGCTTCTTTCTGGTTCATCAACCTCTCACTCTGCCTCAACACCTTCAACAACAGCAGCCACTTCTGCTACCAATCTCCACGGCCTCAACTTCTATCTTTCAGATGGTTCAAAACCAAGGCAATTATACCTGTCCAACCCTGCACTGTCATCTTCACCTTCCCATCCAACCATCACTCTCGACCTCACTTCACACCCAGCTTCTTCCTCCTCATCACCCTTCGTTAGGTTCTCTTCAAACTATAACCAACCCAGATACCCCTCTTCCTCAAGCCTAAGCTTCAGTAGTTCCTCAGAAATCAATGCATTGTCGTGGAGCAACGGCTTCCTTAACAATAATAATACTATTCAACCACCATATAATACGAGGAACATACTTGGGAATGTAAACTTTGGGAGACAACAAGTGGAAAATATATACCAATCCTACATGCAAAAGAACAACAGCAATATTCCAAACGTTCCTCAAGGTGGTGTACCAGCTGATACTATATCTGCAGCAACGAAAGTGATCACAGCAGACCCTACTTTTCAATCAGCTTTGGCAGCAGCGCTCACTTCGTTTATTGGTGGTGGTGTTCGAGGAAATCAAGGCGGTAATAGTGTTGGAGAAAGTCCAAGTTTGGGTCAGAAAATGAAGTGGGGTGAGGTGTTTCCCGCGTCTAATAATTCCTCTTCTACCTTGCCTTGTTCAACTTCGAAAGTCAATGGTTGTGCATCGAGCTTCTTGAACAAAACGCCCGCGAATAATACACAGACGAAAAGTTTGATGTTTCTACCGCCGTCGTCTTTGCCGTTTTCCACCCCCAAAAGTGCATCTGCATCTGCGTCTCCTGCTGATAATAGCGACACCACCAATTAA 1812 0.4437 MELASERSGDGGSGLKEEKRSDDYTVGDAEDAPHKQQIIVQEAPAANTERSKQEAGPSTSADKKEEVDDQLESTKAEMGVVREENQRLKRSLNKIMSEYRTLEMQFQDVLKQGTKRNKGNDNQEDTLEESDLVSLSLGRVPNNQRNDEKIKVCKKLKDDEGFNEDLTLGLCKSKSGSTTEALPNPSPENSSEVPKEEAGETWPPSKETQKTIRDTEDEVAQQNPMKKPRVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAPSCPVRKQVQRCVDDMSILITTYEGTHNHTLPPSATAMASTTSAAASMLLSGSSTSHSASTPSTTAATSATNLHGLNFYLSDGSKPRQLYLSNPALSSSPSHPTITLDLTSHPASSSSSPFVRFSSNYNQPRYPSSSSLSFSSSSEINALSWSNGFLNNNNTIQPPYNTRNILGNVNFGRQQVENIYQSYMQKNNSNIPNVPQGGVPADTISAATKVITADPTFQSALAAALTSFIGGGVRGNQGGNSVGESPSLGQKMKWGEVFPASNNSSSTLPCSTSKVNGCASSFLNKTPANNTQTKSLMFLPPSSLPFSTPKSASASASPADNSDTTN* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02942 603 ProSiteProfiles WRKY domain profile. 236 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02942 603 FunFam probable WRKY transcription factor 31 226 303 - -
Phac3g02942 603 SUPERFAMILY WRKY DNA-binding domain 234 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g02942 603 MobiDBLite consensus disorder prediction 41 55 - -
Phac3g02942 603 MobiDBLite consensus disorder prediction 173 191 - -
Phac3g02942 603 MobiDBLite consensus disorder prediction 567 603 - -
Phac3g02942 603 MobiDBLite consensus disorder prediction 173 226 - -
Phac3g02942 603 MobiDBLite consensus disorder prediction 1 78 - -
Phac3g02942 603 Gene3D WRKY domain 226 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g02942 603 MobiDBLite consensus disorder prediction 371 391 - -
Phac3g02942 603 MobiDBLite consensus disorder prediction 111 132 - -
Phac3g02942 603 MobiDBLite consensus disorder prediction 11 30 - -
Phac3g02942 603 MobiDBLite consensus disorder prediction 56 78 - -
Phac3g02942 603 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 55 518 IPR044810 GO:0003700
Phac3g02942 603 Coils Coil 64 105 - -
Phac3g02942 603 Pfam WRKY DNA -binding domain 242 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02942 603 MobiDBLite consensus disorder prediction 193 223 - -
Phac3g02942 603 SMART WRKY_cls 241 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02942 Phac-Chr3 31059548 31064037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02942 67 511 WRKY Transcription Factor Family AT1G18860 41.468 1.06e-84 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac3g02942 WRKY 1.9e-23 CL0274