Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02938 ATGGGTAAGTCACCAGGAAAATGGATCAAAACCGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGCAGAGAGAAGCTTGTTAATAAAAAAGAAGGAGTAATAGTTACCTCCAAAGTGCCAGAAACGGGTTTGACCTTAGAACCAGCCTCCAATATTATTCCCAATCATGATGAAGTCCAGGAGCTGGGAAACAAAGAAGCAGAAAATGTTTTACCTGGCAATCAAGAAATAGACTTAGTGGGATCTACTAATGAAGAGGATGCACTAGATCCAGAGAAAATGAAGCTGGAGGAAGCAGCAACAAAGGCACAAGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCCCTCAAAGGCATAATAAGGTTGCAAGCACTCATTCGCGGGCACTTGGTTAGGAGGCAAGCTGTTGTTACATTATGCTCTATGTATGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAAGAGTTAGGCAGTCTAATGTTGGATCCGAAATCCACGAGAAGTGCAATATATTGAACCCTCTGGATGGAAAATTTGTCAAGCCAATTGCTATATCCACGAAAATTACAAAGCTGTCAGCAAATGCGTTCATTCTTAAGCTTTTTACCTCGTCAACTACAATAATGGCACTGCGTTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTCAATTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCAGGATATTAAGGCTCAAAGAAGGCATGGCAGTATTTCAGTTGGCGATACTCAAACGAGTAAGTCAAAACGTACTAACAGGAAGCTGCCTACTCCGAATTTTGACTCAGTCCCAGTGCAAGCAAGTCATGAATTTGAAAAACCTAAACGAAACACAAGGAAAATTCCAAGTCAGCCCTCAGATCCCGTGCAGGAAAACACACAAAATGAGTTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAATCCTGTTGTTGAGAATGCTGTTCCTTCAGAAGTTGAAACAGAGATGCCAAAGGAACATTTGGAAAAGGCCACAGTTACCTCATCCCTTACTGTTTCGGAACAAGAGGTTGTTAGTTTTAATGAGAAGATCAAGAAGGAAGCATCATTAACTGCTTCCAGTGTGCTGGATATAGAAACTACTCCTAGACTTTCAGCTAGTAACGAAATCCTTGACACACCAAGCAGTATTCAAGTGGCTGTGGAATCGAAGCCCTTGACTGAAATTACAACCAAAGATAAAAATATTTCTGATGAAGTAAAACATGAGCCCATAGATTTGCCAGAGTCTAATTTTAAAGATGAAAATTCTCACTTCACAAATGGAGATTTGAGTCACAAGGAAGATCCAATAGGCAGTGAAAACCAGAAACCAAACCGAAAAGCTTCTATTGTAGCAAAGCAGGAACGTGCAGAGAATGGTATACAGAATAGTCCAACATTGCCAAGTTACATGGCAGCAACTGAATCTGCAAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAAAGAAACAACCAGACCCGGCGACATTCTTTGCCGTCCTCAACTAACAGCAAAATTAGTTCGCATTCACCTAGGACACACAGACCAGTTCAATCAGGTCAGTCAGGTGGCAAAGGGGGCAACAGAAGTGACAGAACTGTATCAACATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAGTGGAGGAGGTAA 1767 0.4165 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNKKEGVIVTSKVPETGLTLEPASNIIPNHDEVQELGNKEAENVLPGNQEIDLVGSTNEEDALDPEKMKLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCSMYGIVKFQALVRGGRVRQSNVGSEIHEKCNILNPLDGKFVKPIAISTKITKLSANAFILKLFTSSTTIMALRLQYVPGDPNSVLSWLERWSASQFWKPVPQPKKIQDIKAQRRHGSISVGDTQTSKSKRTNRKLPTPNFDSVPVQASHEFEKPKRNTRKIPSQPSDPVQENTQNEFEKVKRNLRKVHNPVVENAVPSEVETEMPKEHLEKATVTSSLTVSEQEVVSFNEKIKKEASLTASSVLDIETTPRLSASNEILDTPSSIQVAVESKPLTEITTKDKNISDEVKHEPIDLPESNFKDENSHFTNGDLSHKEDPIGSENQKPNRKASIVAKQERAENGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNNQTRRHSLPSSTNSKISSHSPRTHRPVQSGQSGGKGGNRSDRTVSTSSRDGNGKVIQAEWRR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02938 588 Pfam IQ calmodulin-binding motif 124 141 IPR000048 GO:0005515
Phac3g02938 588 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Phac3g02938 588 MobiDBLite consensus disorder prediction 519 579 - -
Phac3g02938 588 MobiDBLite consensus disorder prediction 425 588 - -
Phac3g02938 588 Gene3D - 97 146 - -
Phac3g02938 588 Pfam Protein of unknown function (DUF4005) 483 558 IPR025064 -
Phac3g02938 588 MobiDBLite consensus disorder prediction 485 500 - -
Phac3g02938 588 MobiDBLite consensus disorder prediction 249 320 - -
Phac3g02938 588 PANTHER IQ-DOMAIN 5-RELATED 1 543 - -
Phac3g02938 588 MobiDBLite consensus disorder prediction 454 470 - -
Phac3g02938 588 MobiDBLite consensus disorder prediction 425 448 - -
Phac3g02938 588 SMART iq_5 99 121 IPR000048 GO:0005515
Phac3g02938 588 SMART iq_5 122 143 IPR000048 GO:0005515
Phac3g02938 588 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Phac3g02938 588 MobiDBLite consensus disorder prediction 264 291 - -
Phac3g02938 588 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02938 Phac-Chr3 31030296 31038421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02938 1 588 IQD Protein Family AT1G74690 44.141 1.01e-123 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02938 - - gmx:100794636 956.051