Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02907 ATGCACGAAAATAGAGATCCTGCAATTAGGCTCTTCGGCCAGAAGATCCCCTTCCCTGAAGATGTTGACATAGAAGAAGAAGAAGAAGATGATGATAATGATGAGGGTTGTGATGGAAGAGACCAAGAGATAGAAGAGGATAAGGATGCTGGAGTTGACAATGTTACCGAGGAAGAGCTAGAAGCTGATTCTGCTCCAAGTGCAGGAGAGACTAAAGATTCAGGTACCCCTGAGGCTATTGTGAACCCCGAAACACCCTCCATAGAAGAAGAAACTGCAAAATCAAAAGCTGACAAATCAGAGAAGGAGCAAGGCGATGCAGCCAACTCACAAGAGAAAACTCTGAAGAAACCAGATAAAGTGCTACCATGCCCCCGCTGCAAAAGTATGGACACTAAGTTTTGTTACTACAACAACTACAATGTCAACCAGCCACGTTATTTCTGCAAAGCTTGTCAAAGATACTGGACTGCAGGTGGCACCATGAGGAATGTTCCTGTGGGGGCAGGGCGGCGAAAGAACAAGAACTCTACCTCGCATTATCGCCACATCAGTATCTCTGAGGCCCTTCAAGCAGCCAGAATTGATTCTCATAATGGAACTCATCTTCCAACTTTGAAAGGCAATGGTAGAGTTCTCAGCTTTGGATTAGATGCAAATGCACCAATTTGTGATTCCATGGCATCTGTCCTCAATCTTGGAGAGAAAAAGGTTCCTAATGGCACAAAAAATGGGTTTCCTCCTGGCTTTGAGGATCAAGGACTCCCTATTCCTCGCAAAAGTGGGGAAAATGGTGATGACTCTTCGACTACATCTTCCATTACAGTTTCAAATTCCATGGGAGAAAGTAGCAAAAGCACCTTCCAACAACAACCGGTGCTCCAACCTCATGGTTTCATTCCTCAACTTCCGTGTGTTCCTTGGCCCTTTACATGGAATTCTCCCGTTCCCCCACCTGCTTTGTGTCCTTCCGGATTTCCCTTACCATTCTATCCTCCTGCTACATTCTGGAACTGTGGTATGCCAGGGAATTGGAATGTTCCATGGTTTTCTTCACTTTCATCTGCTTCAAACCCAAACTCTCCAAGCTCCGCTCCAAACTCTCCGACTTTGGGGAAGCACTCGCGGGACGGAGACATGATTAAGCAGGACTCTTTGCACAAAGAAGAAGCTTCAAAGCCAAGAAACGGGGGTGTTTTGGTTCCCAAAACCTTGAGAATTGATGATCCAAATGAAGCTGCAAAGAGTTCTATATGGGCAACTCTAGGAATTAAGAATGAGTCATTGAGTGGGGGAGGTATGTTTAAGGCCTTCCAATCAAAGAAGGACGAAAAGAATCGTGTTGAAGCCTCTCCAGTGTTGATGGCTAACCCTGCAGCTTTATCTAGATCCCTCAATTTTCATGAGAACTCATGA 1416 0.4527 MHENRDPAIRLFGQKIPFPEDVDIEEEEEDDDNDEGCDGRDQEIEEDKDAGVDNVTEEELEADSAPSAGETKDSGTPEAIVNPETPSIEEETAKSKADKSEKEQGDAANSQEKTLKKPDKVLPCPRCKSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSTSHYRHISISEALQAARIDSHNGTHLPTLKGNGRVLSFGLDANAPICDSMASVLNLGEKKVPNGTKNGFPPGFEDQGLPIPRKSGENGDDSSTTSSITVSNSMGESSKSTFQQQPVLQPHGFIPQLPCVPWPFTWNSPVPPPALCPSGFPLPFYPPATFWNCGMPGNWNVPWFSSLSSASNPNSPSSAPNSPTLGKHSRDGDMIKQDSLHKEEASKPRNGGVLVPKTLRIDDPNEAAKSSIWATLGIKNESLSGGGMFKAFQSKKDEKNRVEASPVLMANPAALSRSLNFHENS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02907 471 MobiDBLite consensus disorder prediction 1 122 - -
Phac3g02907 471 MobiDBLite consensus disorder prediction 21 42 - -
Phac3g02907 471 ProSitePatterns Zinc finger Dof-type signature. 124 160 IPR003851 GO:0003677|GO:0006355
Phac3g02907 471 PANTHER CYCLIC DOF FACTOR 2 1 471 IPR045174 GO:0003700|GO:0006355
Phac3g02907 471 ProSiteProfiles Zinc finger Dof-type profile. 122 176 IPR003851 GO:0003677|GO:0006355
Phac3g02907 471 MobiDBLite consensus disorder prediction 355 371 - -
Phac3g02907 471 MobiDBLite consensus disorder prediction 263 291 - -
Phac3g02907 471 Pfam Dof domain, zinc finger 119 176 IPR003851 GO:0003677|GO:0006355
Phac3g02907 471 MobiDBLite consensus disorder prediction 89 122 - -
Phac3g02907 471 MobiDBLite consensus disorder prediction 50 64 - -
Phac3g02907 471 MobiDBLite consensus disorder prediction 355 378 - -
Phac3g02907 471 MobiDBLite consensus disorder prediction 239 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02907 Phac-Chr3 30730588 30733905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02907 1 469 C2C2-Dof Transcription Factor Family AT3G47500 48.770 2.02e-125 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac3g02907 zf-Dof 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02907 - - gmx:778113 778.474