Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02901 ATGGGAGAGAAGGAGTGGTACTTTTTCTGTGTCAGAGACAGAAAATACCCCACTGGGTTGAGAACCAACAGGGCCACTGAAGCCGGTTACTGGAAAGCCACGGGGAAAGACAAAGAGATTTTCAGAGGAAAATCTTTGGTCGGAATGAAAAAAACTCTCGTTTTCTACCGAGGTCGAGCACCCAAAGGAGAGAAAAGCAACTGGGTCATGCACGAGTACAGACTCGAGGGGAAATTCTCTGTTCACAACCTCCCCAAAACTGCAAAGAACGAGTGGGTGATCTGCAGGGTGTTTCAGAAAAGTTCTGCGGGGAAGAAAACTCATATTTCGGGGATAATGAGGTTGGACTCTTTCGCCAATGAATTGGGTTCTTCTGCTCTGCCACCCCTTTCGGATTCTTCACCTTCTATTGGCAACACTAAACCGCTCAATGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCAAAGAAACCAAGAAGGGGTCTTTGATTCCCTCAACAACTCTATTTATGGGGTTTCTTCAAATCCCTTGGACTTTCTTCCCAGAATGCCACCTTCTGCCTCGTTCTACTCCACTCAAGCTGTTCAAGCTGTGCCTAATTTGACATTTCCCGGTTCTGTTTACACTCTGCAGGACCACACCATTCTGAGAGCCATGTGTGAAAACAATGGTAATGATTACAAGTCAGAGAGGGACATGATCAGTGTTTCACAGGAAACGGGTCTTACTACTGACATCAACCCTGAAACCTCTTCAAATTTTGATATGGGTAGGAGGCACTTTGACAATCACAATCATCCATCTGTTTCTGTTTCTGTTGCTCCATTGGATCTTGATGGTTTGTGGAATTACTAA 867 0.4521 MGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKKTHISGIMRLDSFANELGSSALPPLSDSSPSIGNTKPLNESAYVPCFSNPIDVQRNQEGVFDSLNNSIYGVSSNPLDFLPRMPPSASFYSTQAVQAVPNLTFPGSVYTLQDHTILRAMCENNGNDYKSERDMISVSQETGLTTDINPETSSNFDMGRRHFDNHNHPSVSVSVAPLDLDGLWNY* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02901 288 ProSiteProfiles NAC domain profile. 1 100 IPR003441 GO:0003677|GO:0006355
Phac3g02901 288 SUPERFAMILY NAC domain 2 100 IPR036093 GO:0003677|GO:0006355
Phac3g02901 288 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 190 - -
Phac3g02901 288 Gene3D NAC domain 1 104 IPR036093 GO:0003677|GO:0006355
Phac3g02901 288 Pfam No apical meristem (NAM) protein 2 75 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02901 Phac-Chr3 30682959 30685005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02901 1 288 NAC Transcription Factor Family AT5G61430 59.722 2.26e-115 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac3g02901 NAM 4.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02901 - - gmx:100798002 540.036