Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02900 ATGGAAAAGCTTTCGCTGCTTTCTAAGGAAGACCATCACATGGATTTGCCTCCGGGATTTCGCTTCCACCCCACTGATGAAGAGCTTATAACCCATTACCTCTACAAGAAGGTCATTGACACCAACTTCTGCGCTAGGGCCATTGGAGAAGTCGACCTCAACAAGTCTGAGCCTTGGGATTTGCCATGGAAAGCCAAAATGGGAGAGAAGGAGTGGTACTTTTTCTGTGTCAGAGACAGAAAATACCCCACTGGGTTGAGAACCAACAGGGCCACTGAAGCCGGTTACTGGAAAGCCACGGGGAAAGACAAAGAGATTTTCAGAGGAAAATCTTTGGTCGGAATGAAAAAAACTCTCGTTTTCTACCGAGGTCGAGCACCCAAAGGAGAGAAAAGCAACTGGGTCATGCACGAGTACAGACTCGAGGGGAAATTCTCTGTTCACAACCTCCCCAAAACTGCAAAGAACGAGTGGGTGATCTGCAGGGTGTTTCAGAAAAGTTCTGCGGGGAAGAAAACTCATATTTCGGGGATAATGAGGTTGGACTCTTTCGCCAATGAATTGGGTTCTTCTGCTCTGCCACCCCTTTCGGATTCTTCACCTTCTATTGGCAACACTAAACCGCTCAATGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCAAAGAAACCAAGAAGGGGTCTTTGATTCCCTCAACAACTCTATTTATGGGGTTTCTTCAAATCCCTTGGACTTTCTTCCCAGAATGCCACCTTCTGCCTCGTTCTACTCCACTCAAGCTGTTCAAGCTGTGCCTAATTTGACATTTCCCGGTTCTGTTTACACTCTGCAGGACCACACCATTCTGAGAGCCATGTGTGAAAACAATGGTAATGATTACAAGTCAGAGAGGGACATGATCAGTGTTTCACAGGAAACGGGTCTTACTACTGACATCAACCCTGAAACCTCTTCAAATTTTGATATGGGTAGGAGGCACTTTGACAATCACAATCATCCATCTGTTTCTGTTTCTGTTGCTCCATTGGATCTTGATGGTTTGTGGAATTACTAA 1065 0.4573 MEKLSLLSKEDHHMDLPPGFRFHPTDEELITHYLYKKVIDTNFCARAIGEVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKKTHISGIMRLDSFANELGSSALPPLSDSSPSIGNTKPLNESAYVPCFSNPIDVQRNQEGVFDSLNNSIYGVSSNPLDFLPRMPPSASFYSTQAVQAVPNLTFPGSVYTLQDHTILRAMCENNGNDYKSERDMISVSQETGLTTDINPETSSNFDMGRRHFDNHNHPSVSVSVAPLDLDGLWNY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02900 354 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Phac3g02900 354 FunFam NAC domain-containing protein 100-like 25 170 - -
Phac3g02900 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 253 - -
Phac3g02900 354 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Phac3g02900 354 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Phac3g02900 354 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02900 Phac-Chr3 30682959 30685005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02900 14 354 NAC Transcription Factor Family AT5G07680 59.238 3.14e-137 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac3g02900 NAM 2.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02900 - - gmx:100170719 660.603