Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02895 ATGGAAACTGAAATAATCCAGGGACCTTGGGGATTTCGCTCTCTGTCCAAATTCATAGTGTGCACCATTTCTGGGGCCCTCACCGTGTGTTTCGCCATTGCTGGTGCAATGACAGGAGCTATAGCTGGAGCTTTAGCAGCTAAGGCTACAAGGAGTGGTCTTCTCCGGGGAGTTTCATTGGGTGCCATTGCCGGGTCTATACTCTCAGTGGAGGTGTTGGAAGCTTCCCGTGCATACTGGTGTATGGAACAAACTGGCTCACGGGGAGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGGGGGAGGCTTGTTGAGGAATCCCTTACACCTGCCATTTTAACTGCCTACAATTTGCAGGTTGGCATTGCTAATGCAGGCTACGATGAGATTCATGATGTTCATGGCTTAGTGGCACCCAGAGGATTGTCAGGAGATTCACTGAAGAGGTTACCGCACCATATGATCTCAAAGGATATGAAGGCAGAAAATACTTGTTGTACAATATGTTTGCAGGATATTGAAGTAGGCGAAATTGCAAGAAGCTTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTAAAGAATGATTCCTGTCCTGTCTGCAGACAGAATGTGTAA 642 0.4657 METEIIQGPWGFRSLSKFIVCTISGALTVCFAIAGAMTGAIAGALAAKATRSGLLRGVSLGAIAGSILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILTAYNLQVGIANAGYDEIHDVHGLVAPRGLSGDSLKRLPHHMISKDMKAENTCCTICLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02895 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 15 212 IPR044523 -
Phac3g02895 213 SUPERFAMILY RING/U-box 149 213 - -
Phac3g02895 213 SMART ring_2 168 209 IPR001841 -
Phac3g02895 213 CDD RING-H2_NIPL1-like 167 210 - -
Phac3g02895 213 Pfam Ring finger domain 168 210 IPR001841 -
Phac3g02895 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 213 IPR013083 -
Phac3g02895 213 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02895 Phac-Chr3 30658177 30662303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02895 14 213 C3H Transcription Factor Family AT1G74410 57.711 3.95e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02895 - - gmx:100800105 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02895 3 30658177 30662303 Phac3g02895 3 30658177 30662303 ECH