Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02894 ATGGAAACTGAAATAATCCAGGGACCTTGGGGATTTCGCTCTCTGTCCAAATTCATAGTGTGCACCATTTCTGGGGCCCTCACCGTGTGTTTCGCCATTGCTGGTGCAATGACAGGAGCTATAGCTGGAGCTTTAGCAGCTAAGGCTACAAGGAGTGGTCTTCTCCGGGGAGTTTCATTGGGTGCCATTGCCGGGTCTATACTCTCAGTGGAGGTGTTGGAAGCTTCCCGTGCATACTGGTGTATGGAACAAACTGGCTCACGGGGAGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGGGGGAGGCTTGTTGAGGAATCCCTTACACCTGCCATTTTAACTGCCTACAATTTGCAGTTTGAGCAGGTTGGCATTGCTAATGCAGGCTACGATGAGATTCATGATGTTCATGGCTTAGTGGCACCCAGAGGATTGTCAGGAGATTCACTGAAGAGGTTACCGCACCATATGATCTCAAAGGATATGAAGGCAGAAAATACTTGTTGTACAATATGTTTGCAGGATATTGAAGTAGGCGAAATTGCAAGAAGCTTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTAAAGAATGATTCCTGTCCTGTCTGCAGACAGAATGTGTAA 651 0.4654 METEIIQGPWGFRSLSKFIVCTISGALTVCFAIAGAMTGAIAGALAAKATRSGLLRGVSLGAIAGSILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILTAYNLQFEQVGIANAGYDEIHDVHGLVAPRGLSGDSLKRLPHHMISKDMKAENTCCTICLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02894 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 216 IPR013083 -
Phac3g02894 216 SMART ring_2 171 212 IPR001841 -
Phac3g02894 216 Pfam Ring finger domain 171 213 IPR001841 -
Phac3g02894 216 CDD RING-H2_NIPL1-like 170 213 - -
Phac3g02894 216 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 15 215 IPR044523 -
Phac3g02894 216 SUPERFAMILY RING/U-box 152 216 - -
Phac3g02894 216 ProSiteProfiles Zinc finger RING-type profile. 171 213 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02894 Phac-Chr3 30658177 30662303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02894 14 216 C3H Transcription Factor Family AT1G74410 56.863 4.01e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02894 - - gmx:100800105 403.675