Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02892 ATGGATGCTGAAACTGAGACCGAGGAACTTATTAATTTGAACAATAAAGCAAGTAACTGTGGTGGGAATAATAGTAAGAGTGGCGATGGCTTTATTGACAGAAGCAAAGTGAGGATTTTGTTGTGTGACAACGATTCCAAGAGTTCTGAAGAGGTTTTTACTCTTCTTCTGGGGTGTTCTTATCAGGTGATGTCTGCACAAGATGAGATATCCGTTGTTGTAAAGTGTTTGAGGCTTGGAGCAGCAGATTACCTAGTGAAGCCTTTACGCACAAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGACGCATGCTTGGCCTTGTGGAGAACAACATCTTGAATTATGAGTTTGAACTGGTAGCATCAGATCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAGGCACTAATCCAGAGACAGTAGTATCAATCCAACAAGAACAAGAGGTTAGTATTGCCGCTGCCGCCAGTATTGTGGTGGAGCTTCCCAGTGCTCTTGTATCAGAATATCAGCCTGATGTGCCTGGAATAAGTGATCGCCGAACAGGACATTTTTCAACTGGTCCAAAGAAGAGTGAACTGAAGATTGGAGAGTCATCAGCCTTTTTCACCTATGTCAAAGCAACAGCACTGAAGCGCAACATTGAAGAGAGTGCTCATGTTGAAAATACTACTACAGAAGTTAGGGTGGAACATGTGAATCAAGCATGTGGTGAACAGGAGGGTAATGACCTTAAAACACATGAAAATGGAGAAATGTTTGAAAATCATTCACAAGATGACTTACCCAGCAGCAACAGTATCCCTGATTCTTTCTCTATTGAAAGATCTTGTACTCCACCTGCTTCGATGGAAGTTTCTCAGCAAAAGCATTACAGGGAAGAACATTCTCAAGGAGTAGTGCATCCAAGAAATGGAAGTCATGGTTCCGATCCTGCTCAACATGTTTATCCATATTATATTTCAGGAGTTGTTAATCATGTTATGATGCCATCATCAGCACAAATATATCAAAAGAATATCCAAGAACTGCAAAGTCATTCTAGTTCATCTGTGATTGCACAGTACAATCATCTTCCCCACTGTCCTCCTCATGCGAGTGGGATGACACCCTTCCCATATTATCCAATGAACATTTGCTTACAACCTGGTCAGATTTCTACAACTCATTCTTGGCCATCATTAGGAAGTTCAAGTTCATGTGAAGTAAAATTAAGTAAGGTTGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGGAAAGAACGCTGTTTTGAGAAGAAAATTAGGTATGTCAACAGAAAACGGCTTGCAGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCCGAAAGTTGAATGGTGTTAATGTGGATCTTAATGGACAACCTACTTCCACTGATTATGATGAAGAAGATGATGAAGAGGAGGAAGACAACCATGTAGCAAGAGATTTCTCTCCTGAGGATGCTTGA 1521 0.4116 MDAETETEELINLNNKASNCGGNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVMSAQDEISVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYEFELVASDPSDANTNSTTLFSDDTDDKSKRGTNPETVVSIQQEQEVSIAAAASIVVELPSALVSEYQPDVPGISDRRTGHFSTGPKKSELKIGESSAFFTYVKATALKRNIEESAHVENTTTEVRVEHVNQACGEQEGNDLKTHENGEMFENHSQDDLPSSNSIPDSFSIERSCTPPASMEVSQQKHYREEHSQGVVHPRNGSHGSDPAQHVYPYYISGVVNHVMMPSSAQIYQKNIQELQSHSSSSVIAQYNHLPHCPPHASGMTPFPYYPMNICLQPGQISTTHSWPSLGSSSSCEVKLSKVDRREAALMKFRQKRKERCFEKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPTSTDYDEEDDEEEEDNHVARDFSPEDA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02892 506 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 174 477 IPR045281 GO:0009909
Phac3g02892 506 MobiDBLite consensus disorder prediction 271 300 - -
Phac3g02892 506 ProSiteProfiles CCT domain profile. 425 467 IPR010402 GO:0005515
Phac3g02892 506 Gene3D - 62 182 - -
Phac3g02892 506 ProSiteProfiles Response regulatory domain profile. 1 102 IPR001789 GO:0000160
Phac3g02892 506 MobiDBLite consensus disorder prediction 471 506 - -
Phac3g02892 506 Pfam CCT motif 425 467 IPR010402 GO:0005515
Phac3g02892 506 MobiDBLite consensus disorder prediction 481 495 - -
Phac3g02892 506 MobiDBLite consensus disorder prediction 131 152 - -
Phac3g02892 506 MobiDBLite consensus disorder prediction 268 322 - -
Phac3g02892 506 SUPERFAMILY CheY-like 63 109 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02892 Phac-Chr3 30637325 30643568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02892 26 505 Response Regulator Gene Family AT5G61380 42.675 9.26e-130 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac3g02892 CCT 4.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02892 K12127 - gmx:100786522 774.622