Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02890 ATGGATGCTGAAACTGAGACCGAGGAACTTATTAATTTGAACAATAAAGCAAGTAACTGTGGTGGGAATAATAGTAAGAGTGGCGATGGCTTTATTGACAGAAGCAAAGTGAGGATTTTGTTGTGTGACAACGATTCCAAGAGTTCTGAAGAGGTTTTTACTCTTCTTCTGGGGTGTTCTTATCAGGTAACTTCAGTAAGATCAGCTAGGCAACTAATTGATGCACTGAATGCGGAAAGGCAATATATAGACATGATACTAGTTGAAGTTGACCTTCCGGTAAAGAAAGGAATGAAGTTGTTGAAGTACATTACAAGGGATAAAGAATTATGCCGAATCCCTGTTATAATGATGTCTGCACAAGATGAGATATCCGTTGTTGTAAAGTGTTTGAGGCTTGGAGCAGCAGATTACCTAGTGAAGCCTTTACGCACAAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGACGCATGCTTGGCCTTGTGGAGAACAACATCTTGAATTATGAGTTTGAACTGGTAGCATCAGATCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAGGCACTAATCCAGAGACAGTAGTATCAATCCAACAAGAACAAGAGGTTAGTATTGCCGCTGCCGCCAGTATTGTGGTGGAGCTTCCCAGTGCTCTTGTATCAGAATATCAGCCTGATGTGCCTGGAATAAGTGATCGCCGAACAGGACATTTTTCAACTGGTCCAAAGAAGAGTGAACTGAAGATTGGAGAGTCATCAGCCTTTTTCACCTATGTCAAAGCAACAGCACTGAAGCGCAACATTGAAGAGAGTGCTCATGTTGAAAATACTACTACAGAAGTTAGGGTGGAACATGTGAATCAAGCATGTGGTGAACAGGAGGGTAATGACCTTAAAACACATGAAAATGGAGAAATGTTTGAAAATCATTCACAAGATGACTTACCCAGCAGCAACAGTATCCCTGATTCTTTCTCTATTGAAAGATCTTGTACTCCACCTGCTTCGATGGAAGTTTCTCAGCAAAAGCATTACAGGGAAGAACATTCTCAAGGAGTAGTGCATCCAAGAAATGGAAGTCATGGTTCCGATCCTGCTCAACATGTTTATCCATATTATATTTCAGGAGTTGTTAATCATGTTATGATGCCATCATCAGCACAAATATATCAAAAGAATATCCAAGAACTGCAAAGTCATTCTAGTTCATCTGTGATTGCACAGTACAATCATCTTCCCCACTGTCCTCCTCATGCGAGTGGGATGACACCCTTCCCATATTATCCAATGAACATTTGCTTACAACCTGGTCAGATTTCTACAACTCATTCTTGGCCATCATTAGGAAGTTCAAGTTCATGTGAAGTAAAATTAAGTAAGGTTGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGGAAAGAACGCTGTTTTGAGAAGAAAATTAGGTATGTCAACAGAAAACGGCTTGCAGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCCGAAAGTTGAATGGTGTTAATGTGGATCTTAATGGACAACCTACTTCCACTGATTATGATGAAGAAGATGATGAAGAGGAGGAAGACAACCATGTAGCAAGAGATTTCTCTCCTGAGGATGCTTGA 1683 0.407 MDAETETEELINLNNKASNCGGNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVTSVRSARQLIDALNAERQYIDMILVEVDLPVKKGMKLLKYITRDKELCRIPVIMMSAQDEISVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYEFELVASDPSDANTNSTTLFSDDTDDKSKRGTNPETVVSIQQEQEVSIAAAASIVVELPSALVSEYQPDVPGISDRRTGHFSTGPKKSELKIGESSAFFTYVKATALKRNIEESAHVENTTTEVRVEHVNQACGEQEGNDLKTHENGEMFENHSQDDLPSSNSIPDSFSIERSCTPPASMEVSQQKHYREEHSQGVVHPRNGSHGSDPAQHVYPYYISGVVNHVMMPSSAQIYQKNIQELQSHSSSSVIAQYNHLPHCPPHASGMTPFPYYPMNICLQPGQISTTHSWPSLGSSSSCEVKLSKVDRREAALMKFRQKRKERCFEKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPTSTDYDEEDDEEEEDNHVARDFSPEDA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02890 560 Pfam CCT motif 479 521 IPR010402 GO:0005515
Phac3g02890 560 ProSiteProfiles Response regulatory domain profile. 38 156 IPR001789 GO:0000160
Phac3g02890 560 Gene3D - 37 236 - -
Phac3g02890 560 MobiDBLite consensus disorder prediction 525 560 - -
Phac3g02890 560 MobiDBLite consensus disorder prediction 535 549 - -
Phac3g02890 560 MobiDBLite consensus disorder prediction 185 206 - -
Phac3g02890 560 ProSiteProfiles CCT domain profile. 479 521 IPR010402 GO:0005515
Phac3g02890 560 MobiDBLite consensus disorder prediction 325 354 - -
Phac3g02890 560 MobiDBLite consensus disorder prediction 322 376 - -
Phac3g02890 560 PANTHER TWO-COMPONENT RESPONSE REGULATOR 37 250 IPR045279 GO:0009736
Phac3g02890 560 Pfam Response regulator receiver domain 39 150 IPR001789 GO:0000160
Phac3g02890 560 SUPERFAMILY CheY-like 35 163 IPR011006 -
Phac3g02890 560 SMART REC_2 37 152 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02890 Phac-Chr3 30637325 30643568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02890 26 559 Response Regulator Gene Family AT5G61380 50.000 9.28e-179 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Phac3g02890 Response_reg 1.5e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02890 K12127 - gmx:100786522 970.689