Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02878 ATGTCGGACGAAGAGCACCATTTTGAGTCCAAGGCTGACGCCGGAGCCTCCAAAACCTACCCTCAGCAAGCCGGTACAATTCGCAAGAACGGTTACATAGTCATCAAATCCCGTCCCTGCAAGGTTGTGGAAGTCTCTACTTCCAAAACTGGAAAGCACGGTCACGCTAAGTGTCATTTCGTTGGAATTGATATTTTCACTGCTAAGAAGCTTGAGGATATTGTGCCCTCCTCTCACAACTGTGATGTGAGTCTGCTTACGGAAAATGGGAACACTAAGGATGACCTCAGGCTCCCCACTGATGACAGTCTGCTGACTCAGATAAAGGATGGATTTGCGGAGGGCAAGGACCTTGTTGTGTCTGTGATGTCTGCTATGGGTGAGGAACAGATTTGTGCTCTGAAGGATATTGGGCCGAAGAACTAG 426 0.4859 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVSLLTENGNTKDDLRLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPKN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02878 141 Gene3D - 81 137 IPR012340 -
Phac3g02878 141 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 83 138 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Phac3g02878 141 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 83 135 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Phac3g02878 141 NCBIfam translation initiation factor IF-5A 17 86 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Phac3g02878 141 FunFam Eukaryotic translation initiation factor 5A 1 85 - -
Phac3g02878 141 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g02878 141 Gene3D - 1 80 IPR014722 -
Phac3g02878 141 FunFam Eukaryotic translation initiation factor 5A 78 139 - -
Phac3g02878 141 SUPERFAMILY Nucleic acid-binding proteins 76 137 IPR012340 -
Phac3g02878 141 SUPERFAMILY Translation proteins SH3-like domain 15 86 IPR008991 -
Phac3g02878 141 SMART eIF_5a_2 66 135 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Phac3g02878 141 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Phac3g02878 141 PIRSF Transl_init_eIF5A 82 138 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Phac3g02878 141 PIRSF Transl_init_eIF5A 1 84 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02878 Phac-Chr3 30533643 30535337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02878 1 140 Eukaryotic Initiation Factors Gene Family AT1G13950 78.616 1.98e-85 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02878 K03263 K02180 gmx:100499632 272.322