Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02874 ATGTCAGAGCAGGAAACTCATTCTTGTGGCTTACTCTTGTTCTTTTTCTTGGTCCTTCTTTCAGGTAACGTTGTTGTAGGGGAATCTTTGGAAACAGACAAAGAGGTTCTGCTGAGGCTGAAATCGTACCTGGACAGCAAAACTCTTGCAGACAAAGGAGCGTACATAAACTGGAATACCAGTACCTCCAATCCCTGTGAATGGAGTGGAATTTCATGCAGTGATACGGGGAGGGTGGTTCGCATAAGCCTTTCTCGGAGTGACATCACCGGTGAGATATTCAAGAATTTCTCGCAGCTCACTGAACTCGTGCACCTTGATCTCTCTCAGAACACGCTCTCTGGTGAGATTCCTGAGGACTTGAGGCGCTGCCACAAGCTCGTGCATCTCAACCTATCACATAATATTCTTGAAGGGGAGCTGAACTTGACTGGACTGACAAGCTTGCACACACTGGACTTGTCAAATAACAGATTTTTTGGAGATATTGGATTGAATTTCCCTGCCATTTGTGACAATTTAGTCACTCTGAACGTCTCAGGTAATAATAACTTGACTGGCAGGATTGACAACTGCTTTGATCAATGTCTCATGTTGCAGTACTTGGATTTGAGCACCAACAATCTGAGTGGAAGCTTGTGGATGAAGTTTGCCAGGCTCAAAATGTTTTCTGTCGCGGAGAACCATCTAAGTGGGACTATTCCTTTGGAAGCTTTGCCTTTGAATTGTAGCCTTAAAGAACTAGACCTTTCGCAAAATGGATTTGTTGGTGAGGCACCTAAGGGGTTTGCTAACTGCAAGAATTTAAGCAGTCTGAATCTTTCTAGTAACAAATTTACTGGGGGTATTCCTGTTGAGATAGGATCCATTTCGCGGCTCAAAGCATTGTACTTGGGGAACAACAGCTTTTCAAGAGAGATTCCCGAGTCCCTTCTGAACTTAACCAATTTGACCTTTTTGGATTTGAGCAGAAACCGATTTGGTGGGGAAATACAAGAGATATTCGGAAAATTTAAGCAAGTGAGTTTTCTTCTGTTGCACTCAAATAATTACACTGGAGGATTGAGATCCTCAGGAATTCTCACATTGCCAAACATTTGGCGGTTAGACCTAAGCTACAACAACTTTTCAGGTCCGTTACCAGTTGAGATCTCTCAAATGTCAAGTCTGAAGTTTCTAATGTTATGCTACAACCAGTTCAATGGATCCATTCCACCGGAATTTGGAAACATGACTCAACTGCAAGCGCTTGACCTTGCCTTCAACAATTTGAGTGGATCTATACCACCAACCCTTGGAAACTTGAACTCCCTCTTATGGTTGATGCTCGCAAACAATTCTTTAACTGGAAAAATCCCTCCAGAGTTGGGAAACTGTTCAAGCTTGTTATGGCTAAACCTTGCCAACAATAAGCTCTCTGGAAAATTGCCTTCTGAACTGTCCAAAATTGGAAGGAATGCAATGGCCACATTTGAATACAATAGGCGAAACTATAGAATGGTTGCTGGATCTGGTGAATGTTTGGCAATGAGGAGATGGATACCGGCAGATTACCCTCCATTCAGCTTTGTGTATAGCCTTTTAACAAGGAAAAAATGTAGAGAACTTTGGGACAAACTGATCAAAGGGTATGGTGTTTTCCCGTTTTGTGAACCTGGTTCTTCCTTTCGTGTAACACAGATATCCGGGTATATTCAGCTAAGTTCGAACCAGCTCAGTGGTGAAATTCCTCCGGAGATTGGGTCAATGGTCAACTTCAGCATGATGCACTTGGGGTTCAACAATCTCTCTGGGAAGTTACCTCGAGAGATAGGAAGTATTTCCATGGTGGTATTAAACATCACAAGAAACGAGTTTTCAGGCGAAATTCCCCAAGAAATTGGCAACATGAAATGCCTGATGAATCTGGATCTGTCATACAACAATTTCTCGGGAATGTTTCCAACGAATTTGAACAAATTGACAGAGCTTAGCAAGTTCAACATCTCATACAATCCCTACATATCAGGTGAGGTCCCATCAAACGGACAGTTCGTTACCTTTGAAGAAAATTCATATTTAGGTAACCCCCTTTTGATCCTACCCAAGTTTATTCAGAACACTACCAATGATAGAAACACCACCTCTCAGAAAGACCATAAAAAGTCCTCGAGACTGTCTGTGTTTTTGGTGTTTGCCGTTATAACACTGGTTTTCATAGTATGTGGACTTCTCACTATCTTAGTCTGCGTATCGGTGAAAGGCCCTTCAGATGAACCAAGATACCTCTTGAGGGACACAAAACAGTGGCATGATTCGAGCAGCTCGGGATCCTCACCATGGATGTCCGACACAGTGAAGGTCATCCGTTTGAACAAGACAGCTTTCACACATGCCGACATTCTGAAAGCAACTAGCAGCTTCTCCGAGGACAGAATCATAGGAAAAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGATGGCAGACAAGTGGCAGTGAAGAAGCTCCAAAGGGAAGGCCTGGAGGGTGAGAAGGAATTCAAGGCTGAAATGGAGGTTCTGAGTGGTCGTGGCTTTGGTTGGCCTCATCCAAACCTGGTGACACTCTACGGCTGGTGCCTAAACGACTCAGAAAAGATACTAATTTATGAGTACATAGAGGGTGGAAGCTTGGAGGATGTAGTGACTGACAGAACACGTTTGACATGGAGGAGGAGGCTAGAAGTGGCAATTGATGTGGCACGTGCACTAGTGTATCTACACCACGAGTGCTACCCTTCTGTTGTGCACAGAGATGTGAAGGCTAGCAATGTGTTACTAGATAAAGATGGGAAGGCCAAAGTAACTGATTTTGGGCTTGCGAGAGTGGTTGATGTTGGGGATAGCCATGTGAGCACTATGGTGGCTGGGACAGTGGGGTATGTTGCACCTGAATATGGACACACATGGCAGGCTACTACAAAAGGGGATGTGTACAGTTTTGGGGTGTTGATTATGGAGCTTGCAGCAGCAAGAAGAGCAGTGGATGGAGGAGAAGAGTGCTTGGTGGAATGGGCTAGGCGTGTTATGGGTTATGGACGACACCGTCATAATCATCATGGGTTGAGTCGTTCTGTGCCAGTTTTGGTGATGGGTTCTGGGCTTCTTGGTGGGGCTCAGGAGATGAGTGAGTTGCTGAGGATTGGGGTGATGTGCACAGCTGATGCACCACAGGCTAGGCCTAACATGAAAGAGGTTCTTGCTATGCTGATTAAGATATTTAACCCCATTGCCCACTCCAGTTATGGATACCTTGTTTAG 3285 0.4441 MSEQETHSCGLLLFFFLVLLSGNVVVGESLETDKEVLLRLKSYLDSKTLADKGAYINWNTSTSNPCEWSGISCSDTGRVVRISLSRSDITGEIFKNFSQLTELVHLDLSQNTLSGEIPEDLRRCHKLVHLNLSHNILEGELNLTGLTSLHTLDLSNNRFFGDIGLNFPAICDNLVTLNVSGNNNLTGRIDNCFDQCLMLQYLDLSTNNLSGSLWMKFARLKMFSVAENHLSGTIPLEALPLNCSLKELDLSQNGFVGEAPKGFANCKNLSSLNLSSNKFTGGIPVEIGSISRLKALYLGNNSFSREIPESLLNLTNLTFLDLSRNRFGGEIQEIFGKFKQVSFLLLHSNNYTGGLRSSGILTLPNIWRLDLSYNNFSGPLPVEISQMSSLKFLMLCYNQFNGSIPPEFGNMTQLQALDLAFNNLSGSIPPTLGNLNSLLWLMLANNSLTGKIPPELGNCSSLLWLNLANNKLSGKLPSELSKIGRNAMATFEYNRRNYRMVAGSGECLAMRRWIPADYPPFSFVYSLLTRKKCRELWDKLIKGYGVFPFCEPGSSFRVTQISGYIQLSSNQLSGEIPPEIGSMVNFSMMHLGFNNLSGKLPREIGSISMVVLNITRNEFSGEIPQEIGNMKCLMNLDLSYNNFSGMFPTNLNKLTELSKFNISYNPYISGEVPSNGQFVTFEENSYLGNPLLILPKFIQNTTNDRNTTSQKDHKKSSRLSVFLVFAVITLVFIVCGLLTILVCVSVKGPSDEPRYLLRDTKQWHDSSSSGSSPWMSDTVKVIRLNKTAFTHADILKATSSFSEDRIIGKGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGRGFGWPHPNLVTLYGWCLNDSEKILIYEYIEGGSLEDVVTDRTRLTWRRRLEVAIDVARALVYLHHECYPSVVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLIMELAAARRAVDGGEECLVEWARRVMGYGRHRHNHHGLSRSVPVLVMGSGLLGGAQEMSELLRIGVMCTADAPQARPNMKEVLAMLIKIFNPIAHSSYGYLV* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02874 1094 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 881 1086 - -
Phac3g02874 1094 Gene3D Ribonuclease Inhibitor 332 504 IPR032675 -
Phac3g02874 1094 SMART LRR_typ_2 387 410 IPR003591 -
Phac3g02874 1094 SMART LRR_typ_2 146 177 IPR003591 -
Phac3g02874 1094 SMART LRR_typ_2 314 337 IPR003591 -
Phac3g02874 1094 SMART LRR_typ_2 435 459 IPR003591 -
Phac3g02874 1094 SMART LRR_typ_2 100 124 IPR003591 -
Phac3g02874 1094 SMART LRR_typ_2 411 434 IPR003591 -
Phac3g02874 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Phac3g02874 1094 Pfam Leucine Rich repeat 314 330 IPR001611 GO:0005515
Phac3g02874 1094 Pfam Leucine Rich repeat 147 165 IPR001611 GO:0005515
Phac3g02874 1094 Gene3D Ribonuclease Inhibitor 559 710 IPR032675 -
Phac3g02874 1094 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 80 236 - -
Phac3g02874 1094 CDD STKc_IRAK 807 1081 - -
Phac3g02874 1094 Gene3D Transferase(Phosphotransferase) domain 1 881 1088 - -
Phac3g02874 1094 Gene3D Ribonuclease Inhibitor 32 139 IPR032675 -
Phac3g02874 1094 SUPERFAMILY L domain-like 72 353 - -
Phac3g02874 1094 PRINTS Leucine-rich repeat signature 199 212 - -
Phac3g02874 1094 PRINTS Leucine-rich repeat signature 314 327 - -
Phac3g02874 1094 FunFam Putative LRR receptor-like serine/threonine-protein kinase 338 499 - -
Phac3g02874 1094 SUPERFAMILY L domain-like 244 668 - -
Phac3g02874 1094 Gene3D Ribonuclease Inhibitor 227 331 IPR032675 -
Phac3g02874 1094 Pfam Leucine rich repeat 82 135 IPR001611 GO:0005515
Phac3g02874 1094 Pfam Leucine rich repeat 244 302 IPR001611 GO:0005515
Phac3g02874 1094 Gene3D Ribonuclease Inhibitor 140 224 IPR032675 -
Phac3g02874 1094 Pfam Protein kinase domain 802 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02874 1094 FunFam Nuclear pore complex protein NUP107 30 190 - -
Phac3g02874 1094 SUPERFAMILY Protein kinase-like (PK-like) 783 1079 IPR011009 -
Phac3g02874 1094 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Phac3g02874 1094 FunFam Suppressor of npr1-1 constitutive 4 770 880 - -
Phac3g02874 1094 Gene3D Phosphorylase Kinase; domain 1 766 880 - -
Phac3g02874 1094 ProSiteProfiles Protein kinase domain profile. 801 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02874 1094 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Phac3g02874 1094 FunFam Inactive leucine-rich repeat receptor-like protein kinase 237 333 - -
Phac3g02874 1094 SMART serkin_6 801 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02874 Phac-Chr3 30510082 30514428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02874 57 1078 Receptor kinase-like Gene Family AT1G55610 32.597 4.55e-154 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Phac3g02874 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02874 - - vum:124845100 2006.11