Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02823 ATGGCGTCTTCGTCCTTGGCAAAGCGATGCCATTACGAAGTGCTCGGTCTCCCCCAAGACTGCGCCCCCGAAGAGATCCGCTCCGCCTACCGCCGTCTCGCTCTTCAGCGCCACCCGGACAAGCTCGTAAAATCGGGTCTCTCCCAAGAGGAAGCCACCGCGCAGTTTCAGGAACTCCAACACGCATACGAAGTTCTATCCGACCCCAAGGAACGCGCTTGGTACGATTCTCACCGTTCCCAAATCCTCTTTTCCGACCCCAATTCCCTCTCCAAATCACTCGTCCCCGACCTCTTCTCCTTTTTCTCAAACACCGTCTATTCCGGCTACTCTGACACCGGAAAGGGCTTCTATAAAGTTTATTCTGATGTTTTCGATAAAATCCTCGCTAACGAGATCAATTTCGCTCGGAAAATGGGGCTCGGAGTTGATGCGGTTCGACAGGCTCCTGTAATGGGGAACCTGGATAGCCCCTACGCGCAGGTTACTGCGTTTTATGGATATTGGTTAGGGTTTTGTACTGTGATGGATTTTTGTTGGGTGGATGAGTATGATGTTATGGCAGGGCCGAACCGGAAGTCGAGGCGGCTTATGGAGGAGGAGAATAATAAGGTGAGGAGGAAGGCGAGAAGAGAGTATAATGATACTGTGAGGAGGTTGGGGGATTTTGTGAAGAAGAGGGATAAGAGGGTGATTGACATGAAGGTGAAGAGGAGTGCGGAGATGGAGAGGAAGAAGGAGGAGGAGAGGGAGAGGAAGAAAAAGTTGGAGCAGGAGAGGAAGGAGAGGGCCATGGCGTATGAGGAGCCTGATTGGGCTAAGGTGGAGGTGGAGGAGGCAGTGGAGGAATGGGTTGAAGAAGGGGATGAGGAGAAGAAGAATGATAAGGAGTTTTACTGTGTGCTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAACCATGAGCAGTCCAAGAAGCATAAGGAGAGGGTTGCGGAGTTCAGGGATTCCATTGGTGACGAGGAGGATTTGGAAGAAGGAAAAGAGGGATTGGGAAGTGAGGAAGATGGGGTTGGGGTGAATGGTGATGGTGGTTATGGGGTTGGAGTGAATGGTGTTGGTGATTTGGAGACGAGGATTCGGGATGGTCTTAATGTTGAAGAGGGGGTAATTAGAAACGGGGGTGAACTGGATGATGATGATGATGGTGGTGGTGGTGATGGTGATGACGATGGTGATGGTGATGACGATGACGAGTTATCCGAAGCTTCGCATGTGAAAGAGGGGAAAGATGCCAATGGGTCGGTTAATCTTGATGATAGTGGCAATCAAGATGATGATAACGATGAAAATGGTGTTCTTGAAGCAATGGTGGCTGGCCACAAGAACAGAAAGCCACGAGCTTCAACGCACAAATCCAAGGCTTCAATAGTTCCATCTCAAATTGAAACTGAGAATGATGAAGTTGGCCCTATGGAATATAACAACCGGAAGAGCACAAGAAAGAAACGTGGAGCTAAGAAAGAGAAGGGTAGGAAAAATTGGGAAGAATCTCAGGAGACTGCTGCCAGTTGCAATGATGAGAATATAAACGGTAATGGAAATGACAATTCTCATGCAGAGGAGTCTTGTTCCCAACATTTTGTGGAAAATGAGGATAATAGTATGGGTAACGAGCAGCAGGTTAGTAGAGGTAATAAGATTTCAATCCAACCCGCTGATAAAAAGGGTGCTGGCAAGGACACAAAAATCAAAGCCAAAATTTCATCCAAAGGAAGAAAAGCAAAGGTAAGAACTTCTGAGTAA 1791 0.4807 MASSSLAKRCHYEVLGLPQDCAPEEIRSAYRRLALQRHPDKLVKSGLSQEEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSLSKSLVPDLFSFFSNTVYSGYSDTGKGFYKVYSDVFDKILANEINFARKMGLGVDAVRQAPVMGNLDSPYAQVTAFYGYWLGFCTVMDFCWVDEYDVMAGPNRKSRRLMEEENNKVRRKARREYNDTVRRLGDFVKKRDKRVIDMKVKRSAEMERKKEEERERKKKLEQERKERAMAYEEPDWAKVEVEEAVEEWVEEGDEEKKNDKEFYCVLCGKKFKSEKQWKNHEQSKKHKERVAEFRDSIGDEEDLEEGKEGLGSEEDGVGVNGDGGYGVGVNGVGDLETRIRDGLNVEEGVIRNGGELDDDDDGGGGDGDDDGDGDDDDELSEASHVKEGKDANGSVNLDDSGNQDDDNDENGVLEAMVAGHKNRKPRASTHKSKASIVPSQIETENDEVGPMEYNNRKSTRKKRGAKKEKGRKNWEESQETAASCNDENINGNGNDNSHAEESCSQHFVENEDNSMGNEQQVSRGNKISIQPADKKGAGKDTKIKAKISSKGRKAKVRTSE* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02823 596 SUPERFAMILY Chaperone J-domain 7 80 IPR036869 -
Phac3g02823 596 MobiDBLite consensus disorder prediction 544 563 - -
Phac3g02823 596 MobiDBLite consensus disorder prediction 569 596 - -
Phac3g02823 596 MobiDBLite consensus disorder prediction 395 414 - -
Phac3g02823 596 ProSitePatterns Zinc finger C2H2 type domain signature. 300 322 IPR013087 -
Phac3g02823 596 ProSitePatterns Nt-dnaJ domain signature. 56 75 IPR018253 -
Phac3g02823 596 Pfam DnaJ domain 11 76 IPR001623 -
Phac3g02823 596 Gene3D DnaJ domain 2 91 IPR036869 -
Phac3g02823 596 PRINTS DnaJ domain signature 51 71 IPR001623 -
Phac3g02823 596 PRINTS DnaJ domain signature 30 45 IPR001623 -
Phac3g02823 596 PRINTS DnaJ domain signature 12 30 IPR001623 -
Phac3g02823 596 Gene3D Classic Zinc Finger 286 348 - -
Phac3g02823 596 SMART ZnF_U1_5 295 329 IPR003604 GO:0003676|GO:0008270
Phac3g02823 596 MobiDBLite consensus disorder prediction 379 596 - -
Phac3g02823 596 MobiDBLite consensus disorder prediction 379 394 - -
Phac3g02823 596 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 4 594 IPR044648 -
Phac3g02823 596 SUPERFAMILY beta-beta-alpha zinc fingers 287 338 IPR036236 -
Phac3g02823 596 Coils Coil 232 266 - -
Phac3g02823 596 ProSiteProfiles Zinc finger C2H2 type domain profile. 298 327 IPR013087 -
Phac3g02823 596 SMART dnaj_3 9 71 IPR001623 -
Phac3g02823 596 MobiDBLite consensus disorder prediction 415 429 - -
Phac3g02823 596 MobiDBLite consensus disorder prediction 513 537 - -
Phac3g02823 596 ProSiteProfiles dnaJ domain profile. 10 79 IPR001623 -
Phac3g02823 596 Pfam Zinc-finger double-stranded RNA-binding 298 323 IPR022755 -
Phac3g02823 596 MobiDBLite consensus disorder prediction 310 332 - -
Phac3g02823 596 MobiDBLite consensus disorder prediction 310 361 - -
Phac3g02823 596 CDD DnaJ 10 68 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02823 Phac-Chr3 30257055 30267460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02823 1 335 C2H2 Transcription Factor Family AT1G74250 72.754 5.31e-166 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac3g02823 DnaJ 2.2e-21 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02823 K09506 - gmx:100788305 825.469