Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac3g02810 | ATGGCTTTCTTTGGTAGAATTGGGAATTTGTTAAGACAGACAGCTAGCAGACAGGTTAGTTCAGAGCTGCGTTCGTCTCCTTCATTTTTCCAGGCTATACGCTGTCTGTCTTCTGCTCCAAGCTCCAAGCTGTTTATAGGAGGTGTTTCGTTTTCCACTGATGAACAAAGCTTGAGGGAAGCTTTTTCAAAATATGGTGAAGTTGTTGATGCAAGGATAATTATGGATCGTGAAACTGGTAGATCCAGGGGGTTTGGATTTGTTACATACACGTCTGTTGAGGAGGCATCGAGTGCCATTCAGGCCTTGGATGGTCAGGACCTTCATGGTCGCTCGATTAGGGTAAATTATGCTAATGAAAGAACTCGTGGATATGGCGGTGGTGGTTCATATGGTGCTGGAGGTGGCGGTGGCTATGGAGGTGCATATGGTGGCGGTGGCTATGGTGGTGGCGGTGGCTACGGTGGTGGTGGCTATGGTGGAAATGCTGGAGGTGGTTATGGTGGTGGTGGCTATGGTGGAAATTCTGGTGGTGGTTATGGTGGTGGTAGCTATGGTGGGAATGCTGGTGGTGGTTATGGTGGTGGTGGTGGCGGCTATGGTGCAGGTGGCTATGGATCAGGTGGCAATTTGGGGGACAGTGGCTCTGGCAATAACTATCCTGCTGCTGACAGTTTTGGAGCTGGTGGTGGTGGCAGCTTCAGTGGTAATTTTGGTGATGCTGGTGGAGTAGGCAATCATGAAAGCTCTACTGGTTTTGGCAGTAGTGGATATGATGGAAGTGCTGTTGATGGTAGTGCTGCAGGTACTGGCACCAGCTTTGGTGGTGGAAATGGAGGGTTAGGCAGTGGTCAATTTGATGGAAAAGCAAGCAGCAACGGAGATGAGGATTACAGGGATGACAATGACGATGCTGATAATTTTGCCAAAAGGGCTTGA | 939 | 0.492 | MAFFGRIGNLLRQTASRQVSSELRSSPSFFQAIRCLSSAPSSKLFIGGVSFSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFVTYTSVEEASSAIQALDGQDLHGRSIRVNYANERTRGYGGGGSYGAGGGGGYGGAYGGGGYGGGGGYGGGGYGGNAGGGYGGGGYGGNSGGGYGGGSYGGNAGGGYGGGGGGYGAGGYGSGGNLGDSGSGNNYPAADSFGAGGGGSFSGNFGDAGGVGNHESSTGFGSSGYDGSAVDGSAAGTGTSFGGGNGGLGSGQFDGKASSNGDEDYRDDNDDADNFAKRA* | 313 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac3g02810 | 312 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 42 | 120 | IPR000504 | GO:0003723 | |
Phac3g02810 | 312 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 4 | 217 | - | - | |
Phac3g02810 | 312 | Gene3D | - | 12 | 140 | IPR012677 | - | |
Phac3g02810 | 312 | SUPERFAMILY | RNA-binding domain, RBD | 37 | 134 | IPR035979 | GO:0003676 | |
Phac3g02810 | 312 | MobiDBLite | consensus disorder prediction | 266 | 290 | - | - | |
Phac3g02810 | 312 | FunFam | Glycine-rich RNA-binding protein 3, mitochondrial | 12 | 139 | - | - | |
Phac3g02810 | 312 | SMART | rrm1_1 | 43 | 116 | IPR000504 | GO:0003723 | |
Phac3g02810 | 312 | MobiDBLite | consensus disorder prediction | 243 | 312 | - | - | |
Phac3g02810 | 312 | CDD | RRM2_NsCP33_like | 43 | 118 | - | - | |
Phac3g02810 | 312 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 44 | 114 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac3g02810 | Phac-Chr3 | 30215496 | 30220778 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac3g02810 | 42 | 142 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 34.653 | 5.95e-11 | 61.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac3g02810 | K12741 | - | gmx:100799124 | 227.639 |