Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02810 ATGGCTTTCTTTGGTAGAATTGGGAATTTGTTAAGACAGACAGCTAGCAGACAGGTTAGTTCAGAGCTGCGTTCGTCTCCTTCATTTTTCCAGGCTATACGCTGTCTGTCTTCTGCTCCAAGCTCCAAGCTGTTTATAGGAGGTGTTTCGTTTTCCACTGATGAACAAAGCTTGAGGGAAGCTTTTTCAAAATATGGTGAAGTTGTTGATGCAAGGATAATTATGGATCGTGAAACTGGTAGATCCAGGGGGTTTGGATTTGTTACATACACGTCTGTTGAGGAGGCATCGAGTGCCATTCAGGCCTTGGATGGTCAGGACCTTCATGGTCGCTCGATTAGGGTAAATTATGCTAATGAAAGAACTCGTGGATATGGCGGTGGTGGTTCATATGGTGCTGGAGGTGGCGGTGGCTATGGAGGTGCATATGGTGGCGGTGGCTATGGTGGTGGCGGTGGCTACGGTGGTGGTGGCTATGGTGGAAATGCTGGAGGTGGTTATGGTGGTGGTGGCTATGGTGGAAATTCTGGTGGTGGTTATGGTGGTGGTAGCTATGGTGGGAATGCTGGTGGTGGTTATGGTGGTGGTGGTGGCGGCTATGGTGCAGGTGGCTATGGATCAGGTGGCAATTTGGGGGACAGTGGCTCTGGCAATAACTATCCTGCTGCTGACAGTTTTGGAGCTGGTGGTGGTGGCAGCTTCAGTGGTAATTTTGGTGATGCTGGTGGAGTAGGCAATCATGAAAGCTCTACTGGTTTTGGCAGTAGTGGATATGATGGAAGTGCTGTTGATGGTAGTGCTGCAGGTACTGGCACCAGCTTTGGTGGTGGAAATGGAGGGTTAGGCAGTGGTCAATTTGATGGAAAAGCAAGCAGCAACGGAGATGAGGATTACAGGGATGACAATGACGATGCTGATAATTTTGCCAAAAGGGCTTGA 939 0.492 MAFFGRIGNLLRQTASRQVSSELRSSPSFFQAIRCLSSAPSSKLFIGGVSFSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFVTYTSVEEASSAIQALDGQDLHGRSIRVNYANERTRGYGGGGSYGAGGGGGYGGAYGGGGYGGGGGYGGGGYGGNAGGGYGGGGYGGNSGGGYGGGSYGGNAGGGYGGGGGGYGAGGYGSGGNLGDSGSGNNYPAADSFGAGGGGSFSGNFGDAGGVGNHESSTGFGSSGYDGSAVDGSAAGTGTSFGGGNGGLGSGQFDGKASSNGDEDYRDDNDDADNFAKRA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02810 312 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 42 120 IPR000504 GO:0003723
Phac3g02810 312 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 4 217 - -
Phac3g02810 312 Gene3D - 12 140 IPR012677 -
Phac3g02810 312 SUPERFAMILY RNA-binding domain, RBD 37 134 IPR035979 GO:0003676
Phac3g02810 312 MobiDBLite consensus disorder prediction 266 290 - -
Phac3g02810 312 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 12 139 - -
Phac3g02810 312 SMART rrm1_1 43 116 IPR000504 GO:0003723
Phac3g02810 312 MobiDBLite consensus disorder prediction 243 312 - -
Phac3g02810 312 CDD RRM2_NsCP33_like 43 118 - -
Phac3g02810 312 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 44 114 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02810 Phac-Chr3 30215496 30220778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02810 42 142 Eukaryotic Initiation Factors Gene Family AT3G16380 34.653 5.95e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02810 K12741 - gmx:100799124 227.639