Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02796 ATGAGTGGCATGATGAATGAAAGTTCAAGTAAAGTTCAGCTAGCCAATCAACAAGAGGGTGAGAACATTAAAACTGAGAAATTCTCAAAGGCACCCTCCACCTCAAGATCATGGTCAACATTCAGAAACCCGAGAATTGTACGAGTGTCGCGTTCTTTGGGAGGAAAAGATAGACACAGCAAGGTTTGCACCATTAGGGGACTGAGGGACCGAAGGATTAGACTGTCTGTACCCACAGCAATTCAGTTATATGATCTTCAAGACAAGCTTGGACTCAACCAACCTAGCAAGGTGGTAGATTGGTTGCTTGAAGTCACCAAATCTGATATTGATAAACTCCCACCACTTCAATTTCCTCACTGTTTTACCCAGTTTCACCAACAAACTCCACTGTCAGGTACCTCTCAGTTCTCTCTTGGAAGTTTGTATGATGGTGTTAATTCCGCCTTTATAAAGGATGGGGGAAATAAAAACCTCATGGTAAAGTCAACAAGGTATTGGGATATAGATTCACAAAACCGTACGGAGTTAGCTGAAAGTGTCTCAACCTCCCAGAAGGGAAAGTTCTGGACCAAACCAAATGAACTAGAAAATCATCAAAATGGAAATGGTGGTAGTACTCGTAATAGAGAAGAATCTTCAGCTCATTGTAAGCTCTTCCCCCTCGGGACTAATAGCTCTTATTTACCTGGTTTGTCAAACAATGCCATGACACATAACTCCTACCACCATTCTGAGCCTTCAAGTCTATCTTTATCCCACCTTGGAAGCCATGGATTATTTCCTTCCCATTCAAGCAGTGGCAGTGGTGTGCAATTTTCATCTTCTAATTTCTATGGAACATCTGGTCCCCAATTACTTTTTTGTCCACCTTCTGCTACACCATCTGCTTTTTACTCGGTGGAAAGTGATCCAAGACAATCCAACAATGTTCAGATCTTTAGCTCAAGTTCCCAAGTCATGATGCCTCATCCTCTCATCCAATCTATTCATTCCACCAGTTCACCTCTTAGACGCCTTCCAACATCATTAAGCTCCAAGCTTTTTGATTCAGAAAATAATGATCGTAGCCAACAAGGTAAGGGTGGTACTTGTTCTTGA 1101 0.4196 MSGMMNESSSKVQLANQQEGENIKTEKFSKAPSTSRSWSTFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLEVTKSDIDKLPPLQFPHCFTQFHQQTPLSGTSQFSLGSLYDGVNSAFIKDGGNKNLMVKSTRYWDIDSQNRTELAESVSTSQKGKFWTKPNELENHQNGNGGSTRNREESSAHCKLFPLGTNSSYLPGLSNNAMTHNSYHHSEPSSLSLSHLGSHGLFPSHSSSGSGVQFSSSNFYGTSGPQLLFCPPSATPSAFYSVESDPRQSNNVQIFSSSSQVMMPHPLIQSIHSTSSPLRRLPTSLSSKLFDSENNDRSQQGKGGTCS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02796 366 MobiDBLite consensus disorder prediction 177 210 - -
Phac3g02796 366 Pfam TCP family transcription factor 55 211 IPR017887 -
Phac3g02796 366 MobiDBLite consensus disorder prediction 1 38 - -
Phac3g02796 366 MobiDBLite consensus disorder prediction 330 366 - -
Phac3g02796 366 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
Phac3g02796 366 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 351 IPR005333 GO:0003700
Phac3g02796 366 MobiDBLite consensus disorder prediction 177 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02796 Phac-Chr3 30144529 30146693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02796 39 222 TCP Transcription Factor Family AT5G60970 49.495 1.42e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac3g02796 TCP 9.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02796 - - pvu:PHAVU_003G183700g 667.922