Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02780 ATGGAATCTTGGAGCTTTGTCCCTGAAGAAAAGGAGTGTGTCTCCAATGAGGCACTATCCCCTCCCAACACTCTCGGGAGGACCATAAATTCTTTCTTGGGCTGGGAACTCAAAACCCCATGTGGTTTCTCCAACGAGATGTTGGGTTTGGGTCAGCACACCATTGAGAATCAAGGTTTTGAGGAATTGGGTTTTCCAGAAATGTTGGGGAAACACTTGTCCGATGATCTAATTGCCAGTGTTTCAAGCAGAAAGGTGGATGCTGGAAGACAACACCAACACAGTGACAGAATCACAGGAACTGTTGTGGATGCCCCAAGTGGCTTTTCTCAAAGAAGAGACTCAAATTCCAAGCTTTCAAACTCAAATTCCCTCATTGATTTGAAGCTGGGTCGATTTGCTGACCATGGAGATGCCATTGATCCGGGGTTTTCCAAAGTTTTGTCTTCTTCTGAGTCATCAACGCCTCCTAAGAGAGCGAGAGTTTCGGGGGTTCACTCTCAGACTGCATATTGCCAAGTCTATGGCTGTAACAAGGATCTCAGCTCCTGTAAAGATTACCACAAGAGGCACAAGGTGTGTGAGGTTCACTCCAAGACTGCCACCGTTATAGTCAATGGTATTGAGCAAAGGTTTTGCCAGCAATGTAGTAGGTTTCATTTGCTGGCTGAATTTGATGATGGTAAGCGAAGCTGCCGTAAACGCCTTGCAGGTCATAATGAGCGTAGAAGAAAGCCACAAATGGGGATTCACCCCGGAAAGTCTGGGAGGTTGCTTCAGCCATGTGGGGATAGCAGATTCCAGGGAACTATGCTAACATCATCCTTTATCCGCCCAGAGATGCTTCCTAGTGGGGTCATGTGTTCTGAGAAATATGGTATGAGTGGCTTCTGGCGACATATCAAAGCAGAACACGGAGCTGGTTTTAGGCATCTTTCTTCTATGCCTGTATCCAATGGACATCCTCAGTCAAGATCGTTATTTCCGTCATATAACGGAAAACAATTTCCTTTTCTTCAAGAAAATTGTGCAACATCCACCACAGGAAGCATCTTCTGTGAGAGCAATAGCCACTATCCACCTACCCTCAGGGCACAGGATTCTGGGTTAAGGCCACTATTCCAGGACACCATAGGAAATGAGGACTTCAATGTTTTTGATACAGCATCAACTGTTCAAGGATTATCGGGGATTTCAGACTCATGTTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCTAGCCAATCATCAGGAATTCCCTTGGTTCACTCCTTGGTTATTCCAAGCAGTCATGGCCATCACTATAGCATGAGTCAGGTGTCTGAAAAGATAGGAATAAGCTCACAGACTTCTTCAAGCCGAGTGTCAGATAGTTTTCCTTCAGAACTGAATCATGCAGATGGAAGTCATCTCAGTCCTGTGTTAATATCAGACCATAATGATATTGTAAACTTTGATATGGCAGATGGTATCTTCCATGGTTCTGAATTCATGAATGTGAAGGATAGACTTTCCTGCGAAGATGGTGCAACCATCGACTTGCTGCAATTGTCATCACAGCTTCAGCGAGTTGAGCATGAGAGGCAATCCTTGCAGGTGAAGCAGGAGAATGATTCTTCTTGCACTCTGCGGATTACATAA 1650 0.4503 MESWSFVPEEKECVSNEALSPPNTLGRTINSFLGWELKTPCGFSNEMLGLGQHTIENQGFEELGFPEMLGKHLSDDLIASVSSRKVDAGRQHQHSDRITGTVVDAPSGFSQRRDSNSKLSNSNSLIDLKLGRFADHGDAIDPGFSKVLSSSESSTPPKRARVSGVHSQTAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTATVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMGIHPGKSGRLLQPCGDSRFQGTMLTSSFIRPEMLPSGVMCSEKYGMSGFWRHIKAEHGAGFRHLSSMPVSNGHPQSRSLFPSYNGKQFPFLQENCATSTTGSIFCESNSHYPPTLRAQDSGLRPLFQDTIGNEDFNVFDTASTVQGLSGISDSCCALSLLSSQSQNSSSQSSGIPLVHSLVIPSSHGHHYSMSQVSEKIGISSQTSSSRVSDSFPSELNHADGSHLSPVLISDHNDIVNFDMADGIFHGSEFMNVKDRLSCEDGATIDLLQLSSQLQRVEHERQSLQVKQENDSSCTLRIT* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02780 549 MobiDBLite consensus disorder prediction 445 466 - -
Phac3g02780 549 Gene3D - 162 233 IPR036893 GO:0003677|GO:0005634
Phac3g02780 549 Coils Coil 517 537 - -
Phac3g02780 549 ProSiteProfiles Zinc finger SBP-type profile. 169 246 IPR004333 GO:0003677
Phac3g02780 549 FunFam Squamosa promoter-binding-like protein 14 163 233 - -
Phac3g02780 549 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 97 535 IPR044817 GO:0003677
Phac3g02780 549 SUPERFAMILY SBT domain 170 249 IPR036893 GO:0003677|GO:0005634
Phac3g02780 549 Pfam SBP domain 172 245 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02780 Phac-Chr3 30041055 30046380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02780 126 287 SBP-box Gene Family AT1G69170 56.173 4.78e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac3g02780 SBP 4.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02780 - - gmx:100817547 946.421