Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02766 ATGACTGCCAACGGAGGGAGTTGTCTGAAGACTCATGATTTCCTGCAGCCACTGGAACGGCTAGAGACGAAGGGGAGTGCGAAGGAAGAAGCCACAGATGAAATATCATGGGTGGTTGAGAAGGCAGGACCTTCAGTTGAGCATCTCTTACCTGGAGGAATTGGGACTTACAGCATTAACCACATTTCATATGTTAATAATAACAATAACAATAGTAATCAAAGGCTTCCGAAAGCAGAGACGTCCCTTTTCGTGCGTCCAGCAACTAGTACGGACAGGAACGATGAGAACTCCAACTGCAGTTCATATACTACTTCCAGCGGTTTCACTTTGTGGGAAGACTCATCGGCGGGGAAGAGGGACAAAACAGGAAAGGAGAATAATTCGGGCGACAAACCCTCTATTGGAGAGTGTGCGGCGACAAAACTAGGACAGTGGACATCAACGGAGCGGACCTCACAGTCGTTTTGTACCAATCATCACGATAGCTTCAGCTCTCGCTCTTCGTCTCAGACAACTGGGCAGAAGAGCCAGAGTTTTATTGAAATGATGAAGTCCGCAAGGGAAAGTGCCCAGGATGAAGCCCTGGAGAACGAAGAAACATTTTTTCTTAAGAAAGAACCTTCCAATAACCAAAGAGAACTGACGGTGAAAGTGGATGGTAAGAGTACCGATCAAAAGCCAAACACACCAAGATCAAAACACTCTGCAACAGAACAGCGGAGAAGGAGCAAAATTAATGACAGATTCCAAATGCTAAGAGAGCTTATTCCACACAGTGACCAAAAGAGGGACAAAGCATCTTTTTTATTAGAGGTCATTGAGTATATTCATTTTTTACAAGAGAAGGTGCACAAGTATGAAGGTTCATTTCAAGGGTGGAGTAACGAGCAAGAAAAATTGATGCCATGGCAGAGAAATAATGACAAGCCAGCAGAAAGCTTTCAACATCGTGGCACTGATAATGGGTCAAGTCCATCTCCAACACTGCTTTTTGCTTCAAAGAATGAGGAGAAAAATATTAGCATCTCTCCAACAATTCCTGGGAGTACCCAGAATGTAGAATCTGGCTTGAGTACACCAACTACCTCCAAGACAATGGACCATCAGGCTGGAATAATGAACAAGGCTTTTCCAATTCCTATTTCTTCACATCTAAATTTCTTCTCTCCAGCACAAATGGGCGGTCCAGGTGGCTTAGTGTCTCAGCTCGCGCATAGACCGGGTTCTGATGCCGAGAACAAATATCAACCTTCAGTGGAGTGTCAGACCATGGCGGCTACCAGTGAAAAGCTGAAAGAGAAAGAACTCGCTATTGAAGGTGGTGCAATTAGCATATCAAGCGTGTACTCAAAAGGGTTGCTGCATACGCTTACACATGCACTGCAAAGTTCAGGGGTGGATTTGTCACAGGCTAGCATCTCAGTGCAAATTGAACTTGGTAAACAGGCAAACATCAGACCAACTATACCAGTGTCAGTGTGTGGTGCTAAGGTATATTGA 1503 0.4471 MTANGGSCLKTHDFLQPLERLETKGSAKEEATDEISWVVEKAGPSVEHLLPGGIGTYSINHISYVNNNNNNSNQRLPKAETSLFVRPATSTDRNDENSNCSSYTTSSGFTLWEDSSAGKRDKTGKENNSGDKPSIGECAATKLGQWTSTERTSQSFCTNHHDSFSSRSSSQTTGQKSQSFIEMMKSARESAQDEALENEETFFLKKEPSNNQRELTVKVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWSNEQEKLMPWQRNNDKPAESFQHRGTDNGSSPSPTLLFASKNEEKNISISPTIPGSTQNVESGLSTPTTSKTMDHQAGIMNKAFPIPISSHLNFFSPAQMGGPGGLVSQLAHRPGSDAENKYQPSVECQTMAATSEKLKEKELAIEGGAISISSVYSKGLLHTLTHALQSSGVDLSQASISVQIELGKQANIRPTIPVSVCGAKVY* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02766 500 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 230 280 IPR011598 GO:0046983
Phac3g02766 500 FunFam BHLH domain class transcription factor 228 300 - -
Phac3g02766 500 MobiDBLite consensus disorder prediction 202 246 - -
Phac3g02766 500 CDD bHLH_AtBIM_like 229 305 - -
Phac3g02766 500 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 228 301 IPR036638 GO:0046983
Phac3g02766 500 Pfam Helix-loop-helix DNA-binding domain 232 281 IPR011598 GO:0046983
Phac3g02766 500 MobiDBLite consensus disorder prediction 111 137 - -
Phac3g02766 500 MobiDBLite consensus disorder prediction 154 179 - -
Phac3g02766 500 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 9 489 IPR044295 GO:0003700|GO:0006351|GO:0046983
Phac3g02766 500 Gene3D - 228 302 IPR036638 GO:0046983
Phac3g02766 500 MobiDBLite consensus disorder prediction 317 365 - -
Phac3g02766 500 MobiDBLite consensus disorder prediction 308 365 - -
Phac3g02766 500 SMART finulus 236 286 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02766 Phac-Chr3 29896443 29904483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02766 6 484 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 46.016 6.06e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g02766 HLH 4.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02766 - - gmx:100808016 756.133