Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02765 ATGATGAAGTCCGCAAGGGAAAGTGCCCAGGATGAAGCCCTGGAGAACGAAGAAACATTTTTTCTTAAGAAAGAACCTTCCAATAACCAAAGAGAACTGACGGTGAAAGTGGATGGTAAGAGTACCGATCAAAAGCCAAACACACCAAGATCAAAACACTCTGCAACAGAACAGCGGAGAAGGAGCAAAATTAATGACAGATTCCAAATGCTAAGAGAGCTTATTCCACACAGTGACCAAAAGAGGGACAAAGCATCTTTTTTATTAGAGGTCATTGAGTATATTCATTTTTTACAAGAGAAGGTGCACAAGTATGAAGGTTCATTTCAAGGGTGGAGTAACGAGCAAGAAAAATTGATGCCATGGCAGAGAAATAATGACAAGCCAGCAGAAAGCTTTCAACATCGTGGCACTGATAATGGGTCAAGTCCATCTCCAACACTGCTTTTTGCTTCAAAGAATGAGGAGAAAAATATTAGCATCTCTCCAACAATTCCTGGGAGTACCCAGAATGTAGAATCTGGCTTGAGTACACCAACTACCTCCAAGACAATGGACCATCAGGCTGGAATAATGAACAAGGCTTTTCCAATTCCTATTTCTTCACATCTAAATTTCTTCTCTCCAGCACAAATGGGCGGTCCAGGTGGCTTAGTGTCTCAGCTCGCGCATAGACCGGGTTCTGATGCCGAGAACAAATATCAACCTTCAGTGGAGTGTCAGACCATGGCGGCTACCAGTGAAAAGCTGAAAGAGAAAGAACTCGCTATTGAAGGTGGTGCAATTAGCATATCAAGCGTGTACTCAAAAGGGTTGCTGCATACGCTTACACATGCACTGCAAAGTTCAGGGGTGGATTTGTCACAGGCTAGCATCTCAGTGCAAATTGAACTTGGTAAACAGGCAAACATCAGACCAACTATACCAGTGTCAGTGTGTGGTGCTAAGGATGGTGAAGTACCTTCTAACAACCAAAAGGTGATGCGCTCTAGAGTTGCTAGTTCTGGGAAGTCTGACCAAGCAATTAAGAAGCTAAAGATTTGCAGAAATTAA 1053 0.4292 MMKSARESAQDEALENEETFFLKKEPSNNQRELTVKVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWSNEQEKLMPWQRNNDKPAESFQHRGTDNGSSPSPTLLFASKNEEKNISISPTIPGSTQNVESGLSTPTTSKTMDHQAGIMNKAFPIPISSHLNFFSPAQMGGPGGLVSQLAHRPGSDAENKYQPSVECQTMAATSEKLKEKELAIEGGAISISSVYSKGLLHTLTHALQSSGVDLSQASISVQIELGKQANIRPTIPVSVCGAKDGEVPSNNQKVMRSRVASSGKSDQAIKKLKICRN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02765 350 Pfam Helix-loop-helix DNA-binding domain 50 99 IPR011598 GO:0046983
Phac3g02765 350 Gene3D - 45 120 IPR036638 GO:0046983
Phac3g02765 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 119 IPR036638 GO:0046983
Phac3g02765 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 98 IPR011598 GO:0046983
Phac3g02765 350 MobiDBLite consensus disorder prediction 126 183 - -
Phac3g02765 350 CDD bHLH_AtBIM_like 47 123 - -
Phac3g02765 350 FunFam BHLH domain class transcription factor 46 118 - -
Phac3g02765 350 MobiDBLite consensus disorder prediction 1 64 - -
Phac3g02765 350 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 347 IPR044295 GO:0003700|GO:0006351|GO:0046983
Phac3g02765 350 SMART finulus 54 104 IPR011598 GO:0046983
Phac3g02765 350 MobiDBLite consensus disorder prediction 135 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02765 Phac-Chr3 29896443 29904483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02765 1 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 46.753 8.68e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g02765 HLH 2.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02765 - - gmx:100808016 598.971