Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02760 ATGGCAGATGTAACCACCTACCCCCGCCACCACCGCCACCCAGACGATGACCAAACCCTGATTCCTTTCCCTTATTGGGACTTAGACTTCGATTATGACCCCGAATTCCATCCTAACCCTTTCTCCCTCACCGACCGTGAGAATCAGGTCAATTTCGTAATGGATCTCTTTCACCAGCGCGTCGAACAGTCGCAACTCACCGATCCCCTCTCTAATGACGCCTTTTTCGGTGTCATCGACGCCCTCGACGACCTTGGCTTCCCCACCGCCGACGACTTATTCGTCGGACGCCGGCTCTCCGTCGGATCTGACTCCGACGAATCGCTCTTCCAGTCCGGAAACGTCGGCAGCGTGTTTGGGATGTGCACGCACTCGGAGGAAGAGTACAACGTGAACGACGACGTTTCGAGCATCCCTCTCTGCTTGGACGCGCTTCAATTAGAAGACAACAGAGACAGTTACGAGGATTTCGAGTGGGAGGAAGTGGTCGACGAGAGAGAAGTTCTGAGCATGCTCGACGACACCTCCGTTTCCGTCTCTGTGGGAATCGAAGAGGAAAGGGAGGAGGAAGTAGAATTTGAATTGGAGGCCAACAATTTGGGATGGCAGGTTCTGTTGAACGCCAATGTGGAGGGTACGAATTCCGAGCCTTATTTCGGGGACAACGAGGATTTCGTATACGCCGCGGAGTACGAAATGTTCGGCCAATTCAACGAGGAATCCGTCGTTGGGAAGCCTCCGGCTTCCGTCTCCGCCGTGAGGAGCCTTCCGGCGGCGGTCGTGAGCGCTGCTGACGTGGCTAACGAAAACGTGGTTTGCGCGGTCTGTAAGGAGGAGTTTGGCGTTGGGGAAGGGGTGAAGCAGTTACCGTGTTCGCATCGTTACCATGGGGACTGCATTGTGCCATGGTTGGGGATAAGGAACACGTGTCCTGTTTGTCGCTTTGAGTTTCCCACTGATGATGCTGATTATGAGCGGAGGAAGGCTCATAGATCTGTTATGTGA 1005 0.5433 MADVTTYPRHHRHPDDDQTLIPFPYWDLDFDYDPEFHPNPFSLTDRENQVNFVMDLFHQRVEQSQLTDPLSNDAFFGVIDALDDLGFPTADDLFVGRRLSVGSDSDESLFQSGNVGSVFGMCTHSEEEYNVNDDVSSIPLCLDALQLEDNRDSYEDFEWEEVVDEREVLSMLDDTSVSVSVGIEEEREEEVEFELEANNLGWQVLLNANVEGTNSEPYFGDNEDFVYAAEYEMFGQFNEESVVGKPPASVSAVRSLPAAVVSAADVANENVVCAVCKEEFGVGEGVKQLPCSHRYHGDCIVPWLGIRNTCPVCRFEFPTDDADYERRKAHRSVM* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02760 334 Pfam Ring finger domain 273 314 IPR001841 -
Phac3g02760 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 320 IPR013083 -
Phac3g02760 334 PANTHER SI:CH211-59O9.10 125 319 - -
Phac3g02760 334 ProSiteProfiles Zinc finger RING-type profile. 273 314 IPR001841 -
Phac3g02760 334 SMART ring_2 273 313 IPR001841 -
Phac3g02760 334 SUPERFAMILY RING/U-box 266 320 - -
Phac3g02760 334 FunFam E3 ubiquitin-protein ligase RING1-like 235 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02760 Phac-Chr3 29866518 29869114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02760 137 320 C3H Transcription Factor Family AT5G60820 49.519 1.01e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02760 - - gmx:100794303 485.337