Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02749 ATGATTCTAGTAGAATTATTGATGGAAACTTTGATGGGTCTTAAAGCAGGGAAGCCTGTTCAAGTTCCAGTATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGACTGTTGAAGTCCCAAGCTCTCGTATTGTAATCATAGAAGGCATCTATGCCTTAAGTGAAAGGTTAAGGCCTTTGCTTGATCTTCGTGTTTCTGTCACCGGTGGAGTTCATTTTGACCTTGTTAAGCGTGTATTACGGGACATTCACCGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTATATTGAGCCAGATCTCCAAACAGCACATATAAAAATCATTAACAAGTTTAATCCATTCTCTGGATTTCAGAATCCGACATACATATTGAAGTCAGCCAGAACTGTGACAGTTGAGCAAATCAAGGAAACTATTGCTGCCCAGCATACTGAAACCAAAGAGGAAACGTATGACATATTTCTTCTACCGCCTGGTGAAGACCCTGAAGCCTGTCAATCATATTTGAGAATGAGAAACCGTGATGGAAAGTACAATCTCATGTTTGAGGAATGGGTGACTGATAGTCCATTCATAATATCTCCTAGAATTACTTTCGAGGTCAGTGTGCGCCTTCTTGGAGGGCTGATGGCCTTAGGATACACAATTGCATCTATCCTGAAAAGAAGCAGCCATATTTTTCATGATGATAAAGTGACCATAAAAACTGATTGGTTAGAACAACTTAATCGCACATATGTTCAGGTGCAAGGGAAAGACAGGAACTATTGCAAGTTTGTAGCAGGGAAACTGGGGTTGGATGGTTCCTATGTTCCTCGCACTTATATTGAACAAATTCAGCTAGAAAAGCTTGTGAACGATGTGATGGCATTGCCAGACGATCTTAAGTCAAAACTCAGCTTAGATGATGACTTAGTTTCAAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGTATCTTAATCGTGGTATTTCACACTCATATTCGACTCAAAGGGACAGGATTCTACCTAAGCTGACTAAACTTGCTATAAATAACAGAAGATTCGATGGAAGAGCTCTTGAATCACCTGCATCAATTGCTAACCATGGGGTCATCACTCAACTTTCTGATCAAATTTCCACATTAAATGAAAGAATGGATGAATTCACCTCCCGTATTGAAGAATTGAATTCAAAGTTTACTAGCAAAACAGTTTCAGCCAGTCAACAAAACTTGGCTTCACAGGCTGAGGCCAGTAATGGCTCAGGCCCCACTTCCTTGTTTGCAACTGGATTAGGCAATGGTTCATTGACTGCATCATTGCTGCCTAATTCTTCATCATCTTCTCAATTGGCGAAAGAGTCTCCCCTGATGGACGAGGTGTTAGTTATTGCACGGGGACAACGTCAAATCATGCATCAAGTAGACACTCTGAGCAATCTTTTGCATGAATACTTTGGAGAAAGGTCACGCCTTGGAAGACCAAATCAGACAGGTAGAATGCGTGAACCTGAATCTGTTGCCATCCCTATGGTTCTCACTCTGGTCACTGGTGTCGTTGGTGTGTTGTTGTTCAAGGGTATGACATCCCAAAAGTAG 1638 0.4127 MILVELLMETLMGLKAGKPVQVPVYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHFDLVKRVLRDIHRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKIINKFNPFSGFQNPTYILKSARTVTVEQIKETIAAQHTETKEETYDIFLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIASILKRSSHIFHDDKVTIKTDWLEQLNRTYVQVQGKDRNYCKFVAGKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKSKLSLDDDLVSSPKEALSRASADRRMKYLNRGISHSYSTQRDRILPKLTKLAINNRRFDGRALESPASIANHGVITQLSDQISTLNERMDEFTSRIEELNSKFTSKTVSASQQNLASQAEASNGSGPTSLFATGLGNGSLTASLLPNSSSSSQLAKESPLMDEVLVIARGQRQIMHQVDTLSNLLHEYFGERSRLGRPNQTGRMREPESVAIPMVLTLVTGVVGVLLFKGMTSQK* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02749 545 Pfam Phosphoribulokinase / Uridine kinase family 5 121 IPR006083 GO:0005524|GO:0016301
Phac3g02749 545 Pfam CYTH domain 137 289 IPR023577 -
Phac3g02749 545 ProSiteProfiles CYTH domain profile. 133 295 IPR023577 -
Phac3g02749 545 CDD UMPK_like 5 124 - -
Phac3g02749 545 SUPERFAMILY CYTH-like phosphatases 144 292 IPR033469 -
Phac3g02749 545 Coils Coil 385 412 - -
Phac3g02749 545 Gene3D - 2 157 IPR027417 -
Phac3g02749 545 PANTHER URIDINE KINASE 5 307 - -
Phac3g02749 545 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 121 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02749 Phac-Chr3 29778109 29790229 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02749 5 121 PRT Gene Family AT3G27440 30.508 4.49e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02749 K00876 - gmx:100803122 938.717