Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02747 ATGGCACAAGATACTGTTTTTGGTGCTGACTCACCTCGACGACGTCTATTGCGAGATCAGGTTCAAGTGGTTAAAAGAAAGGATTCTGATCGCTATGAAATTGTTCCTATCCAAGATTCCCTGTCATTTGAGAAAGGATTTTTCATATTCATTCGTGCGTGCCAATTGCTGGCTCAAAAGAATGATGGAATCATATTAGTAGGAGTTGCAGGTCCATCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGATCCTCAATTTTATGCCAAGCATTGCGGTCATAACAATGGACAATTATAATGATTCTAGTAGAATTATTGATGGAAACTTTGATGACCCTCGGTTGACGGATTATGATACCTTGCTTGAAAATATACAGGGTCTTAAAGCAGGGAAGCCTGTTCAAGTTCCAGTATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGACTGTTGAAGTCCCAAGCTCTCGTATTGTAATCATAGAAGGCATCTATGCCTTAAGTGAAAGGTTAAGGCCTTTGCTTGATCTTCGTGTTTCTGTCACCGGTGGAGTTCATTTTGACCTTGTTAAGCGTGTATTACGGGACATTCACCGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTATATTGAGCCAGATCTCCAAACAGCACATATAAAAATCATTAACAAGTTTAATCCATTCTCTGGATTTCAGAATCCGACATACATATTGAAGTCAGCCAGAACTGTGACAGTTGAGCAAATCAAGGAAACTATTGCTGCCCAGCATACTGAAACCAAAGAGGAAACGTATGACATATTTCTTCTACCGCCTGGTGAAGACCCTGAAGCCTGTCAATCATATTTGAGAATGAGAAACCGTGATGGAAAGTACAATCTCATGTTTGAGGAATGGGTGACTGATAGTCCATTCATAATATCTCCTAGAATTACTTTCGAGGTCAGTGTGCGCCTTCTTGGAGGGCTGATGGCCTTAGGATACACAATTGCATCTATCCTGAAAAGAAGCAGCCATATTTTTCATGATGATAAAGTGACCATAAAAACTGATTGGTTAGAACAACTTAATCGCACATATGTTCAGGTGCAAGGGAAAGACAGGAACTATTGCAAGTTTGTAGCAGGGAAACTGGGGTTGGATGGTTCCTATGTTCCTCGCACTTATATTGAACAAATTCAGCTAGAAAAGCTTGTGAACGATGTGATGGCATTGCCAGACGATCTTAAGTCAAAACTCAGCTTAGATGATGACTTAGTTTCAAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGTATCTTAATCGGGGGTCATCACTCAACTTTCTGATCAAATTTCCACATTAA 1404 0.4031 MAQDTVFGADSPRRRLLRDQVQVVKRKDSDRYEIVPIQDSLSFEKGFFIFIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKILNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPVYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHFDLVKRVLRDIHRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKIINKFNPFSGFQNPTYILKSARTVTVEQIKETIAAQHTETKEETYDIFLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIASILKRSSHIFHDDKVTIKTDWLEQLNRTYVQVQGKDRNYCKFVAGKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKSKLSLDDDLVSSPKEALSRASADRRMKYLNRGSSLNFLIKFPH* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02747 467 CDD UMPK_like 66 238 - -
Phac3g02747 467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 235 IPR027417 -
Phac3g02747 467 Pfam CYTH domain 251 403 IPR023577 -
Phac3g02747 467 Gene3D - 65 272 IPR027417 -
Phac3g02747 467 SUPERFAMILY CYTH-like phosphatases 258 406 IPR033469 -
Phac3g02747 467 PANTHER URIDINE KINASE 17 421 - -
Phac3g02747 467 Pfam Phosphoribulokinase / Uridine kinase family 67 235 IPR006083 GO:0005524|GO:0016301
Phac3g02747 467 ProSiteProfiles CYTH domain profile. 247 409 IPR023577 -
Phac3g02747 467 PRINTS Uridine kinase signature 187 197 - -
Phac3g02747 467 PRINTS Uridine kinase signature 131 146 - -
Phac3g02747 467 PRINTS Uridine kinase signature 64 81 - -
Phac3g02747 467 PRINTS Uridine kinase signature 223 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02747 Phac-Chr3 29776139 29790229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02747 66 320 PRT Gene Family AT5G40870 25.379 3.42e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02747 K00876 - gmx:100803122 857.055