LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac3g02747	ATGGCACAAGATACTGTTTTTGGTGCTGACTCACCTCGACGACGTCTATTGCGAGATCAGGTTCAAGTGGTTAAAAGAAAGGATTCTGATCGCTATGAAATTGTTCCTATCCAAGATTCCCTGTCATTTGAGAAAGGATTTTTCATATTCATTCGTGCGTGCCAATTGCTGGCTCAAAAGAATGATGGAATCATATTAGTAGGAGTTGCAGGTCCATCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGATCCTCAATTTTATGCCAAGCATTGCGGTCATAACAATGGACAATTATAATGATTCTAGTAGAATTATTGATGGAAACTTTGATGACCCTCGGTTGACGGATTATGATACCTTGCTTGAAAATATACAGGGTCTTAAAGCAGGGAAGCCTGTTCAAGTTCCAGTATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGACTGTTGAAGTCCCAAGCTCTCGTATTGTAATCATAGAAGGCATCTATGCCTTAAGTGAAAGGTTAAGGCCTTTGCTTGATCTTCGTGTTTCTGTCACCGGTGGAGTTCATTTTGACCTTGTTAAGCGTGTATTACGGGACATTCACCGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTATATTGAGCCAGATCTCCAAACAGCACATATAAAAATCATTAACAAGTTTAATCCATTCTCTGGATTTCAGAATCCGACATACATATTGAAGTCAGCCAGAACTGTGACAGTTGAGCAAATCAAGGAAACTATTGCTGCCCAGCATACTGAAACCAAAGAGGAAACGTATGACATATTTCTTCTACCGCCTGGTGAAGACCCTGAAGCCTGTCAATCATATTTGAGAATGAGAAACCGTGATGGAAAGTACAATCTCATGTTTGAGGAATGGGTGACTGATAGTCCATTCATAATATCTCCTAGAATTACTTTCGAGGTCAGTGTGCGCCTTCTTGGAGGGCTGATGGCCTTAGGATACACAATTGCATCTATCCTGAAAAGAAGCAGCCATATTTTTCATGATGATAAAGTGACCATAAAAACTGATTGGTTAGAACAACTTAATCGCACATATGTTCAGGTGCAAGGGAAAGACAGGAACTATTGCAAGTTTGTAGCAGGGAAACTGGGGTTGGATGGTTCCTATGTTCCTCGCACTTATATTGAACAAATTCAGCTAGAAAAGCTTGTGAACGATGTGATGGCATTGCCAGACGATCTTAAGTCAAAACTCAGCTTAGATGATGACTTAGTTTCAAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGTATCTTAATCGGGGGTCATCACTCAACTTTCTGATCAAATTTCCACATTAA	1404	0.4031	MAQDTVFGADSPRRRLLRDQVQVVKRKDSDRYEIVPIQDSLSFEKGFFIFIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKILNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPVYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHFDLVKRVLRDIHRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKIINKFNPFSGFQNPTYILKSARTVTVEQIKETIAAQHTETKEETYDIFLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIASILKRSSHIFHDDKVTIKTDWLEQLNRTYVQVQGKDRNYCKFVAGKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKSKLSLDDDLVSSPKEALSRASADRRMKYLNRGSSLNFLIKFPH*	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac3g02747	467	CDD	UMPK_like	66	238	-	-
	Phac3g02747	467	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	18	235	IPR027417	-
	Phac3g02747	467	Pfam	CYTH domain	251	403	IPR023577	-
	Phac3g02747	467	Gene3D	-	65	272	IPR027417	-
	Phac3g02747	467	SUPERFAMILY	CYTH-like phosphatases	258	406	IPR033469	-
	Phac3g02747	467	PANTHER	URIDINE KINASE	17	421	-	-
	Phac3g02747	467	Pfam	Phosphoribulokinase / Uridine kinase family	67	235	IPR006083	GO:0005524\|GO:0016301
	Phac3g02747	467	ProSiteProfiles	CYTH domain profile.	247	409	IPR023577	-
	Phac3g02747	467	PRINTS	Uridine kinase signature	187	197	-	-
	Phac3g02747	467	PRINTS	Uridine kinase signature	131	146	-	-
	Phac3g02747	467	PRINTS	Uridine kinase signature	64	81	-	-
	Phac3g02747	467	PRINTS	Uridine kinase signature	223	236	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac3g02747	Phac-Chr3	29776139	29790229	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac3g02747	66	320	PRT Gene Family	AT5G40870	25.379	3.42e-18	85.1