Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02735 ATGGAAAACATAGACACCTCAAAACTTTCACACCAATCTCATAACCCAAACAAGAATCTTCCTTTGATGCCTATTGAAATAGACAAGTCCTATGAGAAGAGAGTCATGAAGATTCCAAAAGTAGGAAAGAAGATTGAGAAAAAGTTTCTTGGGGTGAGACAAAGGCCTTCAGGAAGATGGATTGCTGAGATCAAGGAATCCTCACAGAAACTAAGGCTTTGGTTAGGAACTTTTGACAAAGCAGAAGAAGCTGCCTTGGCTTATGACTGTGCTGCAAGGCTTCTTAGAGGGAGAAATGCCAAAACAAACTTTCCAAACCTTGGAACCATGAACACTCATGAAGAAGACTACAGCATTTTGGGCAAGAATCCAAGGTCTTACCAACTTCTTAGGCATGCAGTTATGAAGAACCACGCACTTTCAACATCTCTTTATTCCACATTCATGCCTTGGAAAAACCAGATCATGATGAGAGATGAACATGACCCCCTTGTTGAGGAAACTGTAGTTTGTTCCATTCCTGAACAAGGCTCTGGCTGTTGTGGAATTTCATTTGGAAGTTCTAAGGTTTATTCTTCTGTTGTTGTTGCTCCTTCTTTCAGTGCTTCTTCTCATGATGAAACACCCTAA 630 0.4063 MENIDTSKLSHQSHNPNKNLPLMPIEIDKSYEKRVMKIPKVGKKIEKKFLGVRQRPSGRWIAEIKESSQKLRLWLGTFDKAEEAALAYDCAARLLRGRNAKTNFPNLGTMNTHEEDYSILGKNPRSYQLLRHAVMKNHALSTSLYSTFMPWKNQIMMRDEHDPLVEETVVCSIPEQGSGCCGISFGSSKVYSSVVVAPSFSASSHDETP* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02735 209 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Phac3g02735 209 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Phac3g02735 209 CDD AP2 47 107 IPR001471 GO:0003700|GO:0006355
Phac3g02735 209 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Phac3g02735 209 FunFam ethylene-responsive transcription factor RAP2-11 47 106 - -
Phac3g02735 209 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Phac3g02735 209 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 37 124 - -
Phac3g02735 209 MobiDBLite consensus disorder prediction 1 22 - -
Phac3g02735 209 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Phac3g02735 209 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Phac3g02735 209 MobiDBLite consensus disorder prediction 1 19 - -
Phac3g02735 209 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02735 Phac-Chr3 29731725 29733051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02735 43 106 AP2-EREBP Transcription Factor Family AT5G19790 67.188 3.10e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac3g02735 AP2 2.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02735 - K09286 pvu:PHAVU_003G180000g 377.096