Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02728 ATGGGAGCGCGTGGAAGAAGGCATCTGGTAAACGCGTTTGGGGCAGTGTGGGTTGCCCTAATCGGATGCGAGCGAGAACTGGTTCTCTTATCCTGTGAAACTGTCATCATAAATTCACATATCAGCCTCGGCCATGTCCTCGCTCGCGCACCTCCTCTTCCTTCCGCAACTACGAACTTCAATCGCGCCTTCTCGCCTATGGACATCATCGGCAAATCAAAGGAAGACGCGTCGCTTCCTAAAGCAACAATGACAAAAATTATTAAAGAAATGTTACCCCCAGATGTACGTGTTGCAAGAGATGCCCAAGATCTATTGATCGAGTGCTGTGTAGAGTTTATAAACCTCATCTCCTCAGAATCCAATGAAGTATGCAACAGAGAGGAAAAACGGACAATCGCACCTGAGCATGTATTGAAGGCTCTACAGGTTCTTGGATTTGGCGAGTACATCGAAGAAGTTTATGCAGCATATGAACAGCACAAGATGGAGACCATGGACACTTTAAAGGGTGGTAAATGGAGCAATGGAGCTGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGAATGAATGGTGGAGCCATTGCTTCCAAGCAGCCAGATACTGACCAAAGTTTAGATAGTTAA 657 0.4673 MGARGRRHLVNAFGAVWVALIGCERELVLLSCETVIINSHISLGHVLARAPPLPSATTNFNRAFSPMDIIGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNREEKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKMETMDTLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGGAIASKQPDTDQSLDS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02728 218 Gene3D Histone, subunit A 68 205 IPR009072 GO:0046982
Phac3g02728 218 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Phac3g02728 218 FunFam Negative cofactor 2 beta 69 205 - -
Phac3g02728 218 PANTHER PROTEIN DR1 HOMOLOG 65 217 IPR044255 -
Phac3g02728 218 SUPERFAMILY Histone-fold 75 205 IPR009072 GO:0046982
Phac3g02728 218 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 77 142 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02728 Phac-Chr3 29670360 29674527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02728 64 214 CCAAT-DR1 Transcription Factor Family AT5G23090 83.117 5.82e-91 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac3g02728 CBFD_NFYB_HMF 6.8e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02728 K21751 - gmx:100807912 287.345